Gene : Glyma.12G063400 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11937//PTHR11937:SF255 - ACTIN Genomic Order:  634
Name:  ? Glyma.12G063400 Secondary Identifier:  ? PAC:30545613
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G063400 0.5kb upstream 0.5kb upstream 4039 true Chr12: 4648141-4652179 Glycine max
Glyma.12G063400 0.5kb upstream 0.5kb upstream 500 false Chr12: 4651680-4652179 Glycine max
Glyma.12G063400 0.5kb downstream 0.5kb downstream 4039 true Chr12: 4647641-4651679 Glycine max
Glyma.12G063400 0.5kb downstream 0.5kb downstream 500 false Chr12: 4647641-4648140 Glycine max
Glyma.12G063400 1.0kb upstream 1.0kb upstream 4539 true Chr12: 4648141-4652679 Glycine max
Glyma.12G063400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4651680-4652679 Glycine max
Glyma.12G063400 1.0kb downstream 1.0kb downstream 4539 true Chr12: 4647141-4651679 Glycine max
Glyma.12G063400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4647141-4648140 Glycine max
Glyma.12G063400 2.0kb upstream 2.0kb upstream 5539 true Chr12: 4648141-4653679 Glycine max
Glyma.12G063400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4651680-4653679 Glycine max
Glyma.12G063400 2.0kb downstream 2.0kb downstream 5539 true Chr12: 4646141-4651679 Glycine max
Glyma.12G063400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4646141-4648140 Glycine max
Glyma.12G063400 5.0kb upstream 5.0kb upstream 8539 true Chr12: 4648141-4656679 Glycine max
Glyma.12G063400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4651680-4656679 Glycine max
Glyma.12G063400 5.0kb downstream 5.0kb downstream 8539 true Chr12: 4643141-4651679 Glycine max
Glyma.12G063400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4643141-4648140 Glycine max
Glyma.12G063400 10.0kb upstream 10.0kb upstream 13539 true Chr12: 4648141-4661679 Glycine max
Glyma.12G063400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4651680-4661679 Glycine max
Glyma.12G063400 10.0kb downstream 10.0kb downstream 13539 true Chr12: 4638141-4651679 Glycine max
Glyma.12G063400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4638141-4648140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244919 5265 Fabidae Singleton cluster - no MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.599 0.0 253.641 High High
cufflinks 11.7593 0.0 42.2009    
cufflinks 3.75502 0.0 17.6431    
cufflinks 2.64006 0.0 11.7945   Low
cufflinks 10.1427 0.0 37.2482    
cufflinks 10.5162 0.0 45.5354    
cufflinks 4.34065 0.0 16.4695    
cufflinks 6.10704 0.0 25.2856    
cufflinks 6.22905 0.0 21.3055    
cufflinks 1.169        
cufflinks 0.208       Low
cufflinks 0.486        
cufflinks 2.229       High
cufflinks 2.575       High
cufflinks 0.064       Low
cufflinks 1.734        
cufflinks 0.548        
cufflinks 0.576        
cufflinks 1.686        
cufflinks 0.928        
cufflinks 0.335        
cufflinks 1.25        
cufflinks 1.78        
cufflinks 0.262       Low
cufflinks 1.25        
cufflinks 0.514        

0 Strain