Gene : Glyma.12G063600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  636
Name:  ? Glyma.12G063600 Secondary Identifier:  ? PAC:30545549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G063600 0.5kb upstream 0.5kb upstream 4207 true Chr12: 4659292-4663498 Glycine max
Glyma.12G063600 0.5kb upstream 0.5kb upstream 500 false Chr12: 4662999-4663498 Glycine max
Glyma.12G063600 0.5kb downstream 0.5kb downstream 4207 true Chr12: 4658792-4662998 Glycine max
Glyma.12G063600 0.5kb downstream 0.5kb downstream 500 false Chr12: 4658792-4659291 Glycine max
Glyma.12G063600 1.0kb upstream 1.0kb upstream 4707 true Chr12: 4659292-4663998 Glycine max
Glyma.12G063600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4662999-4663998 Glycine max
Glyma.12G063600 1.0kb downstream 1.0kb downstream 4707 true Chr12: 4658292-4662998 Glycine max
Glyma.12G063600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4658292-4659291 Glycine max
Glyma.12G063600 2.0kb upstream 2.0kb upstream 5707 true Chr12: 4659292-4664998 Glycine max
Glyma.12G063600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4662999-4664998 Glycine max
Glyma.12G063600 2.0kb downstream 2.0kb downstream 5707 true Chr12: 4657292-4662998 Glycine max
Glyma.12G063600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4657292-4659291 Glycine max
Glyma.12G063600 5.0kb upstream 5.0kb upstream 8707 true Chr12: 4659292-4667998 Glycine max
Glyma.12G063600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4662999-4667998 Glycine max
Glyma.12G063600 5.0kb downstream 5.0kb downstream 8707 true Chr12: 4654292-4662998 Glycine max
Glyma.12G063600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4654292-4659291 Glycine max
Glyma.12G063600 10.0kb upstream 10.0kb upstream 13707 true Chr12: 4659292-4672998 Glycine max
Glyma.12G063600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4662999-4672998 Glycine max
Glyma.12G063600 10.0kb downstream 10.0kb downstream 13707 true Chr12: 4649292-4662998 Glycine max
Glyma.12G063600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4649292-4659291 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310561 5265 Fabidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5412 0.0 10.236   Low
cufflinks 8.48988 0.0 31.0989   High
cufflinks 3.69671 0.0 15.4516    
cufflinks 3.08795 0.0 13.716    
cufflinks 12.78 0.0 43.7913   High
cufflinks 4.46675 0.0 15.6554    
cufflinks 2.50649 0.0 10.1432   Low
cufflinks 4.74763 0.0 18.5533    
cufflinks 4.18546 0.0 17.1614    
cufflinks 1.109        
cufflinks 0.082       Low
cufflinks 1.261        
cufflinks 2.325       High
cufflinks 3.939       High
cufflinks 0.104       Low
cufflinks 1.451        
cufflinks 0.186       Low
cufflinks 1.403        
cufflinks 1.776        
cufflinks 0.929        
cufflinks 0.209        
cufflinks 1.251        
cufflinks 1.293        
cufflinks 0.107       Low
cufflinks 1.287        
cufflinks 0.297        

0 Strain