Gene : Glyma.12G063700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  637
Name:  ? Glyma.12G063700 Secondary Identifier:  ? PAC:30546478
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G063700 0.5kb upstream 0.5kb upstream 5250 true Chr12: 4670447-4675696 Glycine max
Glyma.12G063700 0.5kb upstream 0.5kb upstream 500 false Chr12: 4670447-4670946 Glycine max
Glyma.12G063700 0.5kb downstream 0.5kb downstream 5250 true Chr12: 4670947-4676196 Glycine max
Glyma.12G063700 0.5kb downstream 0.5kb downstream 500 false Chr12: 4675697-4676196 Glycine max
Glyma.12G063700 1.0kb upstream 1.0kb upstream 5750 true Chr12: 4669947-4675696 Glycine max
Glyma.12G063700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4669947-4670946 Glycine max
Glyma.12G063700 1.0kb downstream 1.0kb downstream 5750 true Chr12: 4670947-4676696 Glycine max
Glyma.12G063700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4675697-4676696 Glycine max
Glyma.12G063700 2.0kb upstream 2.0kb upstream 6750 true Chr12: 4668947-4675696 Glycine max
Glyma.12G063700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4668947-4670946 Glycine max
Glyma.12G063700 2.0kb downstream 2.0kb downstream 6750 true Chr12: 4670947-4677696 Glycine max
Glyma.12G063700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4675697-4677696 Glycine max
Glyma.12G063700 5.0kb upstream 5.0kb upstream 9750 true Chr12: 4665947-4675696 Glycine max
Glyma.12G063700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4665947-4670946 Glycine max
Glyma.12G063700 5.0kb downstream 5.0kb downstream 9750 true Chr12: 4670947-4680696 Glycine max
Glyma.12G063700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4675697-4680696 Glycine max
Glyma.12G063700 10.0kb upstream 10.0kb upstream 14750 true Chr12: 4660947-4675696 Glycine max
Glyma.12G063700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4660947-4670946 Glycine max
Glyma.12G063700 10.0kb downstream 10.0kb downstream 14750 true Chr12: 4670947-4685696 Glycine max
Glyma.12G063700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4675697-4685696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122304792 5265 Fabidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.3751 0.0 114.929 High  
cufflinks 12.8565 0.0 34.3396    
cufflinks 54.6401 0.0 167.919 High High
cufflinks 16.5951 0.0 44.6938    
cufflinks 23.0171 0.0 63.3448 High  
cufflinks 61.4769 0.0 192.708 High High
cufflinks 8.02917 0.0 21.5236   Low
cufflinks 23.9395 0.0 66.0606 High  
cufflinks 26.5498 0.0 73.8885 High  
cufflinks 15.775     High  
cufflinks 40.3     High High
cufflinks 25.364     High  
cufflinks 17.887     High  
cufflinks 11.765     High Low
cufflinks 22.47     High  
cufflinks 14.273     High  
cufflinks 23.641     High  
cufflinks 12.327     High  
cufflinks 9.654     High Low
cufflinks 14.463     High  
cufflinks 33.596     High High
cufflinks 15.398     High  
cufflinks 11.612     High Low
cufflinks 40.367     High High
cufflinks 13.579     High  
cufflinks 26.742     High  

0 Strain