Gene : Glyma.12G063800 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  638
Name:  ? Glyma.12G063800 Secondary Identifier:  ? PAC:30546277
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G063800 0.5kb upstream 0.5kb upstream 2345 true Chr12: 4680402-4682746 Glycine max
Glyma.12G063800 0.5kb upstream 0.5kb upstream 500 false Chr12: 4682247-4682746 Glycine max
Glyma.12G063800 0.5kb downstream 0.5kb downstream 2345 true Chr12: 4679902-4682246 Glycine max
Glyma.12G063800 0.5kb downstream 0.5kb downstream 500 false Chr12: 4679902-4680401 Glycine max
Glyma.12G063800 1.0kb upstream 1.0kb upstream 2845 true Chr12: 4680402-4683246 Glycine max
Glyma.12G063800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4682247-4683246 Glycine max
Glyma.12G063800 1.0kb downstream 1.0kb downstream 2845 true Chr12: 4679402-4682246 Glycine max
Glyma.12G063800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4679402-4680401 Glycine max
Glyma.12G063800 2.0kb upstream 2.0kb upstream 3845 true Chr12: 4680402-4684246 Glycine max
Glyma.12G063800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4682247-4684246 Glycine max
Glyma.12G063800 2.0kb downstream 2.0kb downstream 3845 true Chr12: 4678402-4682246 Glycine max
Glyma.12G063800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4678402-4680401 Glycine max
Glyma.12G063800 5.0kb upstream 5.0kb upstream 6845 true Chr12: 4680402-4687246 Glycine max
Glyma.12G063800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4682247-4687246 Glycine max
Glyma.12G063800 5.0kb downstream 5.0kb downstream 6845 true Chr12: 4675402-4682246 Glycine max
Glyma.12G063800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4675402-4680401 Glycine max
Glyma.12G063800 10.0kb upstream 10.0kb upstream 11845 true Chr12: 4680402-4692246 Glycine max
Glyma.12G063800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4682247-4692246 Glycine max
Glyma.12G063800 10.0kb downstream 10.0kb downstream 11845 true Chr12: 4670402-4682246 Glycine max
Glyma.12G063800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4670402-4680401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312837 5265 Fabidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.2199 0.0 23.1121    
cufflinks 1.74644 0.0 6.00174    
cufflinks 13.7173 0.0 37.0725   High
cufflinks 2.35124 0.0 7.79877    
cufflinks 3.26005 0.0 10.363    
cufflinks 0.956774 0.0 3.452   Low
cufflinks 1.99997 0.0 6.77869    
cufflinks 7.50102 0.0 21.2413    
cufflinks 4.94869 0.0 14.7845    
cufflinks 5.4       High
cufflinks 4.094        
cufflinks 9.488     High High
cufflinks 3.778        
cufflinks 2.532        
cufflinks 0.663       Low
cufflinks 2.818        
cufflinks 1.939        
cufflinks 3.664        
cufflinks 1.02       Low
cufflinks 2.624        
cufflinks 2.737        
cufflinks 3.187        
cufflinks 3.231        
cufflinks 2.918        
cufflinks 2.685        
cufflinks 2.007        

0 Strain