Gene : Glyma.12G052000 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  520
Name:  ? Glyma.12G052000 Secondary Identifier:  ? PAC:30549000
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G052000 0.5kb upstream 0.5kb upstream 3570 true Chr12: 3721576-3725145 Glycine max
Glyma.12G052000 0.5kb upstream 0.5kb upstream 500 false Chr12: 3721576-3722075 Glycine max
Glyma.12G052000 0.5kb downstream 0.5kb downstream 3570 true Chr12: 3722076-3725645 Glycine max
Glyma.12G052000 0.5kb downstream 0.5kb downstream 500 false Chr12: 3725146-3725645 Glycine max
Glyma.12G052000 1.0kb upstream 1.0kb upstream 4070 true Chr12: 3721076-3725145 Glycine max
Glyma.12G052000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3721076-3722075 Glycine max
Glyma.12G052000 1.0kb downstream 1.0kb downstream 4070 true Chr12: 3722076-3726145 Glycine max
Glyma.12G052000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3725146-3726145 Glycine max
Glyma.12G052000 2.0kb upstream 2.0kb upstream 5070 true Chr12: 3720076-3725145 Glycine max
Glyma.12G052000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3720076-3722075 Glycine max
Glyma.12G052000 2.0kb downstream 2.0kb downstream 5070 true Chr12: 3722076-3727145 Glycine max
Glyma.12G052000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3725146-3727145 Glycine max
Glyma.12G052000 5.0kb upstream 5.0kb upstream 8070 true Chr12: 3717076-3725145 Glycine max
Glyma.12G052000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3717076-3722075 Glycine max
Glyma.12G052000 5.0kb downstream 5.0kb downstream 8070 true Chr12: 3722076-3730145 Glycine max
Glyma.12G052000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3725146-3730145 Glycine max
Glyma.12G052000 10.0kb upstream 10.0kb upstream 13070 true Chr12: 3712076-3725145 Glycine max
Glyma.12G052000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3712076-3722075 Glycine max
Glyma.12G052000 10.0kb downstream 10.0kb downstream 13070 true Chr12: 3722076-3735145 Glycine max
Glyma.12G052000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3725146-3735145 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254009 5265 Fabidae View MSA
124072842 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17213 0.0 16.1483    
cufflinks 5.37292 0.0 19.1853    
cufflinks 7.10504 0.0 23.3658   High
cufflinks 4.33278 0.0 16.4406    
cufflinks 3.90369 0.0 15.4535    
cufflinks 6.47302 0.0 22.0644    
cufflinks 3.57244 0.0 14.6118   Low
cufflinks 4.28388 0.0 16.3359    
cufflinks 7.33464 0.0 24.2108   High
cufflinks 1.574        
cufflinks 1.338       Low
cufflinks 2.802        
cufflinks 2.055        
cufflinks 1.719        
cufflinks 0.916       Low
cufflinks 2.932       High
cufflinks 1.161       Low
cufflinks 2.065        
cufflinks 2.06        
cufflinks 3.033       High
cufflinks 1.393        
cufflinks 3.217       High
cufflinks 2.99       High
cufflinks 1.888        
cufflinks 2.974       High
cufflinks 1.815        

0 Strain