Gene : Glyma.12G052400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11042:SF96 - SERINE/THREONINE-PROTEIN KINASE GCN2-RELATED Genomic Order:  524
Name:  ? Glyma.12G052400 Secondary Identifier:  ? PAC:30546026
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G052400 0.5kb upstream 0.5kb upstream 21491 true Chr12: 3752254-3773744 Glycine max
Glyma.12G052400 0.5kb upstream 0.5kb upstream 500 false Chr12: 3773245-3773744 Glycine max
Glyma.12G052400 0.5kb downstream 0.5kb downstream 21491 true Chr12: 3751754-3773244 Glycine max
Glyma.12G052400 0.5kb downstream 0.5kb downstream 500 false Chr12: 3751754-3752253 Glycine max
Glyma.12G052400 1.0kb upstream 1.0kb upstream 21991 true Chr12: 3752254-3774244 Glycine max
Glyma.12G052400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3773245-3774244 Glycine max
Glyma.12G052400 1.0kb downstream 1.0kb downstream 21991 true Chr12: 3751254-3773244 Glycine max
Glyma.12G052400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3751254-3752253 Glycine max
Glyma.12G052400 2.0kb upstream 2.0kb upstream 22991 true Chr12: 3752254-3775244 Glycine max
Glyma.12G052400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3773245-3775244 Glycine max
Glyma.12G052400 2.0kb downstream 2.0kb downstream 22991 true Chr12: 3750254-3773244 Glycine max
Glyma.12G052400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3750254-3752253 Glycine max
Glyma.12G052400 5.0kb upstream 5.0kb upstream 25991 true Chr12: 3752254-3778244 Glycine max
Glyma.12G052400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3773245-3778244 Glycine max
Glyma.12G052400 5.0kb downstream 5.0kb downstream 25991 true Chr12: 3747254-3773244 Glycine max
Glyma.12G052400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3747254-3752253 Glycine max
Glyma.12G052400 10.0kb upstream 10.0kb upstream 30991 true Chr12: 3752254-3783244 Glycine max
Glyma.12G052400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3773245-3783244 Glycine max
Glyma.12G052400 10.0kb downstream 10.0kb downstream 30991 true Chr12: 3742254-3773244 Glycine max
Glyma.12G052400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3742254-3752253 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300628 5265 Fabidae View MSA
124050438 5270 Rosid View MSA
123738209 5271 Pentapetalae View MSA
122791931 5272 Eudicot View MSA
122046632 5273 Angiosperm View MSA
121347424 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98854 0.0 10.9594   High
cufflinks 1.7939 0.0 6.35386    
cufflinks 2.48505 0.0 9.3248   High
cufflinks 1.53444 0.0 5.65384    
cufflinks 1.67397 0.0 7.17724    
cufflinks 1.76833 0.0 6.2597    
cufflinks 2.20843 0.0 8.6847    
cufflinks 1.43385 0.0 5.39956   Low
cufflinks 2.05043 0.0 8.19896    
cufflinks 0.121       Low
cufflinks 0.143       Low
cufflinks 0.193        
cufflinks 0.214        
cufflinks 0.184        
cufflinks 0.175        
cufflinks 0.226       High
cufflinks 0.178        
cufflinks 0.187        
cufflinks 0.225       High
cufflinks 0.197        
cufflinks 0.146       Low
cufflinks 0.223       High
cufflinks 0.221        
cufflinks 0.177        
cufflinks 0.205        
cufflinks 0.185        

0 Strain