Gene : Glyma.12G098900 G. max Wm82.a2.v1
Defline:  (1 of 14) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  989
Name:  ? Glyma.12G098900 Secondary Identifier:  ? PAC:30547956
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G098900 0.5kb upstream 0.5kb upstream 9791 true Chr12: 8564955-8574745 Glycine max
Glyma.12G098900 0.5kb upstream 0.5kb upstream 500 false Chr12: 8564955-8565454 Glycine max
Glyma.12G098900 0.5kb downstream 0.5kb downstream 9791 true Chr12: 8565455-8575245 Glycine max
Glyma.12G098900 0.5kb downstream 0.5kb downstream 500 false Chr12: 8574746-8575245 Glycine max
Glyma.12G098900 1.0kb upstream 1.0kb upstream 10291 true Chr12: 8564455-8574745 Glycine max
Glyma.12G098900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8564455-8565454 Glycine max
Glyma.12G098900 1.0kb downstream 1.0kb downstream 10291 true Chr12: 8565455-8575745 Glycine max
Glyma.12G098900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8574746-8575745 Glycine max
Glyma.12G098900 2.0kb upstream 2.0kb upstream 11291 true Chr12: 8563455-8574745 Glycine max
Glyma.12G098900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8563455-8565454 Glycine max
Glyma.12G098900 2.0kb downstream 2.0kb downstream 11291 true Chr12: 8565455-8576745 Glycine max
Glyma.12G098900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8574746-8576745 Glycine max
Glyma.12G098900 5.0kb upstream 5.0kb upstream 14291 true Chr12: 8560455-8574745 Glycine max
Glyma.12G098900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8560455-8565454 Glycine max
Glyma.12G098900 5.0kb downstream 5.0kb downstream 14291 true Chr12: 8565455-8579745 Glycine max
Glyma.12G098900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8574746-8579745 Glycine max
Glyma.12G098900 10.0kb upstream 10.0kb upstream 19291 true Chr12: 8555455-8574745 Glycine max
Glyma.12G098900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8555455-8565454 Glycine max
Glyma.12G098900 10.0kb downstream 10.0kb downstream 19291 true Chr12: 8565455-8584745 Glycine max
Glyma.12G098900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8574746-8584745 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296537 5265 Fabidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26981 0.0 13.1532    
cufflinks 2.21039 0.0 9.91116   Low
cufflinks 89.0221 0.0 730.734 High High
cufflinks 5.42425 0.0 16.574    
cufflinks 6.81654 0.0 24.6255    
cufflinks 4.93825 0.0 18.1875    
cufflinks 4.89055 0.0 18.2085    
cufflinks 3.77933 0.0 14.6599    
cufflinks 16.6203 0.0 78.5039    
cufflinks 0.645        
cufflinks 0.26       Low
cufflinks 6.008       High
cufflinks 0.483        
cufflinks 0.718        
cufflinks 4.498       High
cufflinks 0.474        
cufflinks 0.388        
cufflinks 0.823        
cufflinks 0.781        
cufflinks 0.539        
cufflinks 0.297        
cufflinks 0.54        
cufflinks 0.512        
cufflinks 0.296        
cufflinks 0.539        
cufflinks 0.268        

0 Strain