Gene : Glyma.12G099500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR18966:SF190 - GLUTAMATE RECEPTOR 3.4-RELATED Genomic Order:  995
Name:  ? Glyma.12G099500 Secondary Identifier:  ? PAC:30546675
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G099500 0.5kb upstream 0.5kb upstream 6714 true Chr12: 8646666-8653379 Glycine max
Glyma.12G099500 0.5kb upstream 0.5kb upstream 500 false Chr12: 8646666-8647165 Glycine max
Glyma.12G099500 0.5kb downstream 0.5kb downstream 6714 true Chr12: 8647166-8653879 Glycine max
Glyma.12G099500 0.5kb downstream 0.5kb downstream 500 false Chr12: 8653380-8653879 Glycine max
Glyma.12G099500 1.0kb upstream 1.0kb upstream 7214 true Chr12: 8646166-8653379 Glycine max
Glyma.12G099500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8646166-8647165 Glycine max
Glyma.12G099500 1.0kb downstream 1.0kb downstream 7214 true Chr12: 8647166-8654379 Glycine max
Glyma.12G099500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8653380-8654379 Glycine max
Glyma.12G099500 2.0kb upstream 2.0kb upstream 8214 true Chr12: 8645166-8653379 Glycine max
Glyma.12G099500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8645166-8647165 Glycine max
Glyma.12G099500 2.0kb downstream 2.0kb downstream 8214 true Chr12: 8647166-8655379 Glycine max
Glyma.12G099500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8653380-8655379 Glycine max
Glyma.12G099500 5.0kb upstream 5.0kb upstream 11214 true Chr12: 8642166-8653379 Glycine max
Glyma.12G099500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8642166-8647165 Glycine max
Glyma.12G099500 5.0kb downstream 5.0kb downstream 11214 true Chr12: 8647166-8658379 Glycine max
Glyma.12G099500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8653380-8658379 Glycine max
Glyma.12G099500 10.0kb upstream 10.0kb upstream 16214 true Chr12: 8637166-8653379 Glycine max
Glyma.12G099500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8637166-8647165 Glycine max
Glyma.12G099500 10.0kb downstream 10.0kb downstream 16214 true Chr12: 8647166-8663379 Glycine max
Glyma.12G099500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8653380-8663379 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253592 5265 Fabidae View MSA
124064754 5270 Rosid View MSA
123739557 5271 Pentapetalae View MSA
122789775 5272 Eudicot View MSA
122045646 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89464 0.0 11.392    
cufflinks 2.52681 0.0 11.8245    
cufflinks 3.35795 0.0 14.082   High
cufflinks 1.02882 0.0 5.63481    
cufflinks 1.58172 0.0 7.5701    
cufflinks 0.927416 0.0 4.4455    
cufflinks 0.289406 0.0 1.90679   Low
cufflinks 2.28286 0.0 11.9693    
cufflinks 0.354402 0.0 2.09613   Low
cufflinks 0.248        
cufflinks 0.007     Low Low
cufflinks 0.349       High
cufflinks 0.123        
cufflinks 0.06     Low  
cufflinks 0.002     Low Low
cufflinks 0.057     Low  
cufflinks 0.033     Low  
cufflinks 0.374       High
cufflinks 0.362       High
cufflinks 0.089     Low  
cufflinks 0.008     Low Low
cufflinks 0.154        
cufflinks 0.156        
cufflinks 0.019     Low  
cufflinks 0.094     Low  
cufflinks 0.016     Low  

0 Strain