Gene : Glyma.12G101300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21530:SF0 - TRAB DOMAIN-CONTAINING PROTEIN Genomic Order:  1013
Name:  ? Glyma.12G101300 Secondary Identifier:  ? PAC:30548221
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G101300 0.5kb upstream 0.5kb upstream 4672 true Chr12: 8921815-8926486 Glycine max
Glyma.12G101300 0.5kb upstream 0.5kb upstream 500 false Chr12: 8925987-8926486 Glycine max
Glyma.12G101300 0.5kb downstream 0.5kb downstream 4672 true Chr12: 8921315-8925986 Glycine max
Glyma.12G101300 0.5kb downstream 0.5kb downstream 500 false Chr12: 8921315-8921814 Glycine max
Glyma.12G101300 1.0kb upstream 1.0kb upstream 5172 true Chr12: 8921815-8926986 Glycine max
Glyma.12G101300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8925987-8926986 Glycine max
Glyma.12G101300 1.0kb downstream 1.0kb downstream 5172 true Chr12: 8920815-8925986 Glycine max
Glyma.12G101300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8920815-8921814 Glycine max
Glyma.12G101300 2.0kb upstream 2.0kb upstream 6172 true Chr12: 8921815-8927986 Glycine max
Glyma.12G101300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8925987-8927986 Glycine max
Glyma.12G101300 2.0kb downstream 2.0kb downstream 6172 true Chr12: 8919815-8925986 Glycine max
Glyma.12G101300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8919815-8921814 Glycine max
Glyma.12G101300 5.0kb upstream 5.0kb upstream 9172 true Chr12: 8921815-8930986 Glycine max
Glyma.12G101300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8925987-8930986 Glycine max
Glyma.12G101300 5.0kb downstream 5.0kb downstream 9172 true Chr12: 8916815-8925986 Glycine max
Glyma.12G101300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8916815-8921814 Glycine max
Glyma.12G101300 10.0kb upstream 10.0kb upstream 14172 true Chr12: 8921815-8935986 Glycine max
Glyma.12G101300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8925987-8935986 Glycine max
Glyma.12G101300 10.0kb downstream 10.0kb downstream 14172 true Chr12: 8911815-8925986 Glycine max
Glyma.12G101300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8911815-8921814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301719 5265 Fabidae View MSA
124064711 5270 Rosid View MSA
123739677 5271 Pentapetalae View MSA
122794129 5272 Eudicot View MSA
122042571 5273 Angiosperm View MSA
121350143 5274 Embryophyte View MSA
123427103 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2923 0.0 38.4347    
cufflinks 9.2489 0.0 25.5672   Low
cufflinks 13.8875 0.0 37.4568    
cufflinks 15.209 0.0 40.8263    
cufflinks 16.6316 0.0 44.4802    
cufflinks 11.0754 0.0 30.1679   Low
cufflinks 15.5386 0.0 41.6798    
cufflinks 17.3704 0.0 46.4334   High
cufflinks 14.234 0.0 38.2608    
cufflinks 4.151        
cufflinks 1.458       Low
cufflinks 3.95        
cufflinks 5.817       High
cufflinks 5.441       High
cufflinks 2.582        
cufflinks 4.409        
cufflinks 3.297        
cufflinks 4.442        
cufflinks 4.237        
cufflinks 3.888        
cufflinks 2.272       Low
cufflinks 4.25        
cufflinks 3.913        
cufflinks 2.449       Low
cufflinks 3.656        
cufflinks 2.883        

0 Strain