Gene : Glyma.12G101500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10811//PTHR10811:SF25 - FRINGE-RELATED Genomic Order:  1015
Name:  ? Glyma.12G101500 Secondary Identifier:  ? PAC:30548232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G101500 0.5kb upstream 0.5kb upstream 5276 true Chr12: 8966678-8971953 Glycine max
Glyma.12G101500 0.5kb upstream 0.5kb upstream 500 false Chr12: 8966678-8967177 Glycine max
Glyma.12G101500 0.5kb downstream 0.5kb downstream 5276 true Chr12: 8967178-8972453 Glycine max
Glyma.12G101500 0.5kb downstream 0.5kb downstream 500 false Chr12: 8971954-8972453 Glycine max
Glyma.12G101500 1.0kb upstream 1.0kb upstream 5776 true Chr12: 8966178-8971953 Glycine max
Glyma.12G101500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8966178-8967177 Glycine max
Glyma.12G101500 1.0kb downstream 1.0kb downstream 5776 true Chr12: 8967178-8972953 Glycine max
Glyma.12G101500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8971954-8972953 Glycine max
Glyma.12G101500 2.0kb upstream 2.0kb upstream 6776 true Chr12: 8965178-8971953 Glycine max
Glyma.12G101500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8965178-8967177 Glycine max
Glyma.12G101500 2.0kb downstream 2.0kb downstream 6776 true Chr12: 8967178-8973953 Glycine max
Glyma.12G101500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8971954-8973953 Glycine max
Glyma.12G101500 5.0kb upstream 5.0kb upstream 9776 true Chr12: 8962178-8971953 Glycine max
Glyma.12G101500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8962178-8967177 Glycine max
Glyma.12G101500 5.0kb downstream 5.0kb downstream 9776 true Chr12: 8967178-8976953 Glycine max
Glyma.12G101500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8971954-8976953 Glycine max
Glyma.12G101500 10.0kb upstream 10.0kb upstream 14776 true Chr12: 8957178-8971953 Glycine max
Glyma.12G101500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8957178-8967177 Glycine max
Glyma.12G101500 10.0kb downstream 10.0kb downstream 14776 true Chr12: 8967178-8981953 Glycine max
Glyma.12G101500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8971954-8981953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300032 5265 Fabidae View MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64459 0.0 10.687    
cufflinks 2.73385 0.0 15.4577   High
cufflinks 1.1761 0.0 8.66196   Low
cufflinks 2.72172 0.0 14.9935    
cufflinks 2.15928 0.0 13.017    
cufflinks 2.25614 0.0 9.47894    
cufflinks 2.28294 0.0 11.7846    
cufflinks 2.46399 0.0 13.8443    
cufflinks 1.41358 0.0 8.63428   Low
cufflinks 0.262        
cufflinks 0.028     Low Low
cufflinks 0.194        
cufflinks 0.285        
cufflinks 0.292        
cufflinks 0.02     Low Low
cufflinks 0.259        
cufflinks 0.099        
cufflinks 0.248        
cufflinks 0.41       High
cufflinks 0.226        
cufflinks 0.035     Low Low
cufflinks 0.235        
cufflinks 0.251        
cufflinks 0.031     Low Low
cufflinks 0.242        
cufflinks 0.091        

0 Strain