Gene : Glyma.12G101600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED Genomic Order:  1016
Name:  ? Glyma.12G101600 Secondary Identifier:  ? PAC:30547583
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G101600 0.5kb upstream 0.5kb upstream 2942 true Chr12: 8972439-8975380 Glycine max
Glyma.12G101600 0.5kb upstream 0.5kb upstream 500 false Chr12: 8972439-8972938 Glycine max
Glyma.12G101600 0.5kb downstream 0.5kb downstream 2942 true Chr12: 8972939-8975880 Glycine max
Glyma.12G101600 0.5kb downstream 0.5kb downstream 500 false Chr12: 8975381-8975880 Glycine max
Glyma.12G101600 1.0kb upstream 1.0kb upstream 3442 true Chr12: 8971939-8975380 Glycine max
Glyma.12G101600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8971939-8972938 Glycine max
Glyma.12G101600 1.0kb downstream 1.0kb downstream 3442 true Chr12: 8972939-8976380 Glycine max
Glyma.12G101600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8975381-8976380 Glycine max
Glyma.12G101600 2.0kb upstream 2.0kb upstream 4442 true Chr12: 8970939-8975380 Glycine max
Glyma.12G101600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8970939-8972938 Glycine max
Glyma.12G101600 2.0kb downstream 2.0kb downstream 4442 true Chr12: 8972939-8977380 Glycine max
Glyma.12G101600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8975381-8977380 Glycine max
Glyma.12G101600 5.0kb upstream 5.0kb upstream 7442 true Chr12: 8967939-8975380 Glycine max
Glyma.12G101600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8967939-8972938 Glycine max
Glyma.12G101600 5.0kb downstream 5.0kb downstream 7442 true Chr12: 8972939-8980380 Glycine max
Glyma.12G101600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8975381-8980380 Glycine max
Glyma.12G101600 10.0kb upstream 10.0kb upstream 12442 true Chr12: 8962939-8975380 Glycine max
Glyma.12G101600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8962939-8972938 Glycine max
Glyma.12G101600 10.0kb downstream 10.0kb downstream 12442 true Chr12: 8972939-8985380 Glycine max
Glyma.12G101600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8975381-8985380 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302549 5265 Fabidae View MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.154427 0.0 0.600882 Low  
cufflinks 2.27702 0.0 7.32098    
cufflinks 0.776838 0.0 2.787    
cufflinks 1.33308 0.0 4.57433    
cufflinks 0.980515 0.0 3.4616    
cufflinks 6.04605 0.0 17.0442   High
cufflinks 0.061667 0.0 0.248177 Low Low
cufflinks 0.347481 0.0 1.30385    
cufflinks 0.211206 0.0 0.810334 Low  
cufflinks 0.084     Low  
cufflinks 0.115        
cufflinks 1.04       High
cufflinks 1.635       High
cufflinks 1.369       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075     Low  
cufflinks 0.02     Low Low
cufflinks 0.884       High
cufflinks 2.29       High
cufflinks 0.051     Low  
cufflinks 0.04     Low  
cufflinks 0.068     Low  
cufflinks 0.114        
cufflinks 0.096        
cufflinks 0.071     Low  
cufflinks 0.077        

0 Strain