Gene : Glyma.12G101800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31062:SF11 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 9 Genomic Order:  1018
Name:  ? Glyma.12G101800 Secondary Identifier:  ? PAC:30546970
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G101800 0.5kb upstream 0.5kb upstream 2977 true Chr12: 8998818-9001794 Glycine max
Glyma.12G101800 0.5kb upstream 0.5kb upstream 500 false Chr12: 9001295-9001794 Glycine max
Glyma.12G101800 0.5kb downstream 0.5kb downstream 2977 true Chr12: 8998318-9001294 Glycine max
Glyma.12G101800 0.5kb downstream 0.5kb downstream 500 false Chr12: 8998318-8998817 Glycine max
Glyma.12G101800 1.0kb upstream 1.0kb upstream 3477 true Chr12: 8998818-9002294 Glycine max
Glyma.12G101800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9001295-9002294 Glycine max
Glyma.12G101800 1.0kb downstream 1.0kb downstream 3477 true Chr12: 8997818-9001294 Glycine max
Glyma.12G101800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8997818-8998817 Glycine max
Glyma.12G101800 2.0kb upstream 2.0kb upstream 4477 true Chr12: 8998818-9003294 Glycine max
Glyma.12G101800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9001295-9003294 Glycine max
Glyma.12G101800 2.0kb downstream 2.0kb downstream 4477 true Chr12: 8996818-9001294 Glycine max
Glyma.12G101800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8996818-8998817 Glycine max
Glyma.12G101800 5.0kb upstream 5.0kb upstream 7477 true Chr12: 8998818-9006294 Glycine max
Glyma.12G101800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9001295-9006294 Glycine max
Glyma.12G101800 5.0kb downstream 5.0kb downstream 7477 true Chr12: 8993818-9001294 Glycine max
Glyma.12G101800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8993818-8998817 Glycine max
Glyma.12G101800 10.0kb upstream 10.0kb upstream 12477 true Chr12: 8998818-9011294 Glycine max
Glyma.12G101800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9001295-9011294 Glycine max
Glyma.12G101800 10.0kb downstream 10.0kb downstream 12477 true Chr12: 8988818-9001294 Glycine max
Glyma.12G101800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8988818-8998817 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311223 5265 Fabidae View MSA
124074045 5270 Rosid View MSA
123744569 5271 Pentapetalae View MSA
122789262 5272 Eudicot View MSA
122045078 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31951 0.0 4.71394   Low
cufflinks 158.187 0.0 498.129 High High
cufflinks 30.5691 0.0 81.6185 High  
cufflinks 159.39 0.0 503.54 High High
cufflinks 36.1445 0.0 96.8615 High  
cufflinks 24.7014 0.0 65.9269 High  
cufflinks 10.5619 0.0 29.3962    
cufflinks 21.69 0.0 57.992 High  
cufflinks 43.1534 0.0 116.492 High  
cufflinks 6.574        
cufflinks 0.908       Low
cufflinks 29.635     High  
cufflinks 21.984     High  
cufflinks 29.294     High  
cufflinks 4.627        
cufflinks 61.678     High High
cufflinks 2.22       Low
cufflinks 26.316     High  
cufflinks 84.559     High High
cufflinks 51.064     High  
cufflinks 1.695       Low
cufflinks 35.09     High  
cufflinks 34.625     High  
cufflinks 0.546       Low
cufflinks 37.355     High  
cufflinks 3.53        

0 Strain