Gene : Glyma.12G102300 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  1023
Name:  ? Glyma.12G102300 Secondary Identifier:  ? PAC:30546695
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G102300 0.5kb upstream 0.5kb upstream 4579 true Chr12: 9071945-9076523 Glycine max
Glyma.12G102300 0.5kb upstream 0.5kb upstream 500 false Chr12: 9076024-9076523 Glycine max
Glyma.12G102300 0.5kb downstream 0.5kb downstream 4579 true Chr12: 9071445-9076023 Glycine max
Glyma.12G102300 0.5kb downstream 0.5kb downstream 500 false Chr12: 9071445-9071944 Glycine max
Glyma.12G102300 1.0kb upstream 1.0kb upstream 5079 true Chr12: 9071945-9077023 Glycine max
Glyma.12G102300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9076024-9077023 Glycine max
Glyma.12G102300 1.0kb downstream 1.0kb downstream 5079 true Chr12: 9070945-9076023 Glycine max
Glyma.12G102300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9070945-9071944 Glycine max
Glyma.12G102300 2.0kb upstream 2.0kb upstream 6079 true Chr12: 9071945-9078023 Glycine max
Glyma.12G102300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9076024-9078023 Glycine max
Glyma.12G102300 2.0kb downstream 2.0kb downstream 6079 true Chr12: 9069945-9076023 Glycine max
Glyma.12G102300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9069945-9071944 Glycine max
Glyma.12G102300 5.0kb upstream 5.0kb upstream 9079 true Chr12: 9071945-9081023 Glycine max
Glyma.12G102300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9076024-9081023 Glycine max
Glyma.12G102300 5.0kb downstream 5.0kb downstream 9079 true Chr12: 9066945-9076023 Glycine max
Glyma.12G102300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9066945-9071944 Glycine max
Glyma.12G102300 10.0kb upstream 10.0kb upstream 14079 true Chr12: 9071945-9086023 Glycine max
Glyma.12G102300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9076024-9086023 Glycine max
Glyma.12G102300 10.0kb downstream 10.0kb downstream 14079 true Chr12: 9061945-9076023 Glycine max
Glyma.12G102300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9061945-9071944 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304911 5265 Fabidae View MSA
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.3197 0.0 20.9991   High
cufflinks 5.53502 0.0 18.6658   High
cufflinks 1.30426 0.0 6.7805   Low
cufflinks 1.97507 0.0 9.00143    
cufflinks 2.02579 0.0 9.26639    
cufflinks 2.03898 0.0 9.43015    
cufflinks 7.48208 0.0 27.6516   High
cufflinks 1.55862 0.0 7.73666    
cufflinks 2.22632 0.0 9.95529    
cufflinks 0.973        
cufflinks 0.402        
cufflinks 0.924        
cufflinks 1.967        
cufflinks 0.433        
cufflinks 0.142       Low
cufflinks 2.231        
cufflinks 0.496        
cufflinks 1.066        
cufflinks 2.132        
cufflinks 1.935        
cufflinks 0.333       Low
cufflinks 2.912       High
cufflinks 2.989       High
cufflinks 0.358       Low
cufflinks 1.854        
cufflinks 0.407        

0 Strain