Gene : Glyma.12G103900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24365:SF368 - OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN Genomic Order:  1039
Name:  ? Glyma.12G103900 Secondary Identifier:  ? PAC:30547490
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G103900 0.5kb upstream 0.5kb upstream 4727 true Chr12: 9337970-9342696 Glycine max
Glyma.12G103900 0.5kb upstream 0.5kb upstream 500 false Chr12: 9337970-9338469 Glycine max
Glyma.12G103900 0.5kb downstream 0.5kb downstream 4727 true Chr12: 9338470-9343196 Glycine max
Glyma.12G103900 0.5kb downstream 0.5kb downstream 500 false Chr12: 9342697-9343196 Glycine max
Glyma.12G103900 1.0kb upstream 1.0kb upstream 5227 true Chr12: 9337470-9342696 Glycine max
Glyma.12G103900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9337470-9338469 Glycine max
Glyma.12G103900 1.0kb downstream 1.0kb downstream 5227 true Chr12: 9338470-9343696 Glycine max
Glyma.12G103900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9342697-9343696 Glycine max
Glyma.12G103900 2.0kb upstream 2.0kb upstream 6227 true Chr12: 9336470-9342696 Glycine max
Glyma.12G103900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9336470-9338469 Glycine max
Glyma.12G103900 2.0kb downstream 2.0kb downstream 6227 true Chr12: 9338470-9344696 Glycine max
Glyma.12G103900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9342697-9344696 Glycine max
Glyma.12G103900 5.0kb upstream 5.0kb upstream 9227 true Chr12: 9333470-9342696 Glycine max
Glyma.12G103900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9333470-9338469 Glycine max
Glyma.12G103900 5.0kb downstream 5.0kb downstream 9227 true Chr12: 9338470-9347696 Glycine max
Glyma.12G103900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9342697-9347696 Glycine max
Glyma.12G103900 10.0kb upstream 10.0kb upstream 14227 true Chr12: 9328470-9342696 Glycine max
Glyma.12G103900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9328470-9338469 Glycine max
Glyma.12G103900 10.0kb downstream 10.0kb downstream 14227 true Chr12: 9338470-9352696 Glycine max
Glyma.12G103900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9342697-9352696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301930 5265 Fabidae View MSA
124067963 5270 Rosid View MSA
123752620 5271 Pentapetalae View MSA
122790403 5272 Eudicot View MSA
122042040 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351261 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.3538 0.0 132.675 High High
cufflinks 15.2095 0.0 52.1988    
cufflinks 21.4155 0.0 77.0673 High  
cufflinks 15.9897 0.0 55.1654    
cufflinks 15.7208 0.0 54.2863    
cufflinks 33.5475 0.0 122.688 High High
cufflinks 34.9302 0.0 141.562 High High
cufflinks 16.8115 0.0 58.4337    
cufflinks 16.507 0.0 51.2675    
cufflinks 7.198        
cufflinks 10.736     High  
cufflinks 7.464     High  
cufflinks 7.334     High  
cufflinks 5.703       Low
cufflinks 16.543     High High
cufflinks 6.711        
cufflinks 10.167     High  
cufflinks 6.086       Low
cufflinks 7.481     High  
cufflinks 7.421     High  
cufflinks 17.085     High High
cufflinks 8.315     High  
cufflinks 7.514     High  
cufflinks 11.783     High  
cufflinks 8.606     High  
cufflinks 18.638     High High

0 Strain