Gene : Glyma.12G104100 G. max Wm82.a2.v1
Defline:  (1 of 7) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1041
Name:  ? Glyma.12G104100 Secondary Identifier:  ? PAC:30548064
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G104100 0.5kb upstream 0.5kb upstream 3671 true Chr12: 9363264-9366934 Glycine max
Glyma.12G104100 0.5kb upstream 0.5kb upstream 500 false Chr12: 9363264-9363763 Glycine max
Glyma.12G104100 0.5kb downstream 0.5kb downstream 3671 true Chr12: 9363764-9367434 Glycine max
Glyma.12G104100 0.5kb downstream 0.5kb downstream 500 false Chr12: 9366935-9367434 Glycine max
Glyma.12G104100 1.0kb upstream 1.0kb upstream 4171 true Chr12: 9362764-9366934 Glycine max
Glyma.12G104100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9362764-9363763 Glycine max
Glyma.12G104100 1.0kb downstream 1.0kb downstream 4171 true Chr12: 9363764-9367934 Glycine max
Glyma.12G104100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9366935-9367934 Glycine max
Glyma.12G104100 2.0kb upstream 2.0kb upstream 5171 true Chr12: 9361764-9366934 Glycine max
Glyma.12G104100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9361764-9363763 Glycine max
Glyma.12G104100 2.0kb downstream 2.0kb downstream 5171 true Chr12: 9363764-9368934 Glycine max
Glyma.12G104100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9366935-9368934 Glycine max
Glyma.12G104100 5.0kb upstream 5.0kb upstream 8171 true Chr12: 9358764-9366934 Glycine max
Glyma.12G104100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9358764-9363763 Glycine max
Glyma.12G104100 5.0kb downstream 5.0kb downstream 8171 true Chr12: 9363764-9371934 Glycine max
Glyma.12G104100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9366935-9371934 Glycine max
Glyma.12G104100 10.0kb upstream 10.0kb upstream 13171 true Chr12: 9353764-9366934 Glycine max
Glyma.12G104100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9353764-9363763 Glycine max
Glyma.12G104100 10.0kb downstream 10.0kb downstream 13171 true Chr12: 9363764-9376934 Glycine max
Glyma.12G104100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9366935-9376934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310372 5265 Fabidae View MSA
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9348 0.0 43.1345   High
cufflinks 2.31873 0.0 6.82209    
cufflinks 8.40767 0.0 22.438    
cufflinks 4.94877 0.0 13.4739    
cufflinks 3.09405 0.0 8.79524    
cufflinks 7.4186 0.0 19.8478    
cufflinks 0.452331 0.0 1.61755   Low
cufflinks 4.17879 0.0 11.5133    
cufflinks 4.07772 0.0 11.2666    
cufflinks 3.189        
cufflinks 6.888     High  
cufflinks 8.566     High  
cufflinks 2.282       Low
cufflinks 1.045       Low
cufflinks 1.171       Low
cufflinks 6.947        
cufflinks 21.532     High High
cufflinks 4.856        
cufflinks 5.48        
cufflinks 9.201     High  
cufflinks 4.324        
cufflinks 12.092     High High
cufflinks 10.927     High  
cufflinks 6.979     High  
cufflinks 7.429     High  
cufflinks 4.027        

0 Strain