Gene : Glyma.12G107200 G. max Wm82.a2.v1
Defline:  (1 of 19) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1072
Name:  ? Glyma.12G107200 Secondary Identifier:  ? PAC:30547480
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G107200 0.5kb upstream 0.5kb upstream 3109 true Chr12: 9832152-9835260 Glycine max
Glyma.12G107200 0.5kb upstream 0.5kb upstream 500 false Chr12: 9832152-9832651 Glycine max
Glyma.12G107200 0.5kb downstream 0.5kb downstream 3109 true Chr12: 9832652-9835760 Glycine max
Glyma.12G107200 0.5kb downstream 0.5kb downstream 500 false Chr12: 9835261-9835760 Glycine max
Glyma.12G107200 1.0kb upstream 1.0kb upstream 3609 true Chr12: 9831652-9835260 Glycine max
Glyma.12G107200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9831652-9832651 Glycine max
Glyma.12G107200 1.0kb downstream 1.0kb downstream 3609 true Chr12: 9832652-9836260 Glycine max
Glyma.12G107200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9835261-9836260 Glycine max
Glyma.12G107200 2.0kb upstream 2.0kb upstream 4609 true Chr12: 9830652-9835260 Glycine max
Glyma.12G107200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9830652-9832651 Glycine max
Glyma.12G107200 2.0kb downstream 2.0kb downstream 4609 true Chr12: 9832652-9837260 Glycine max
Glyma.12G107200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9835261-9837260 Glycine max
Glyma.12G107200 5.0kb upstream 5.0kb upstream 7609 true Chr12: 9827652-9835260 Glycine max
Glyma.12G107200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9827652-9832651 Glycine max
Glyma.12G107200 5.0kb downstream 5.0kb downstream 7609 true Chr12: 9832652-9840260 Glycine max
Glyma.12G107200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9835261-9840260 Glycine max
Glyma.12G107200 10.0kb upstream 10.0kb upstream 12609 true Chr12: 9822652-9835260 Glycine max
Glyma.12G107200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9822652-9832651 Glycine max
Glyma.12G107200 10.0kb downstream 10.0kb downstream 12609 true Chr12: 9832652-9845260 Glycine max
Glyma.12G107200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9835261-9845260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122255072 5265 Fabidae View MSA
124067375 5270 Rosid View MSA
123749787 5271 Pentapetalae View MSA
122794883 5272 Eudicot View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.402707 0.0 1.51028   High
cufflinks 0.0083761 0.0 0.0396294 Low Low
cufflinks 0.136081 0.0 0.534149 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.050206 0.0 0.205269 Low  
cufflinks 0.0118761 0.0 0.0543952 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.008     Low Low
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132        
cufflinks 0.535       High
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 0.157        
cufflinks 0.015     Low Low
cufflinks 0.157        
cufflinks 0.005     Low Low

0 Strain