Gene : Glyma.12G108000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF01342 - SAND domain (SAND) Genomic Order:  1080
Name:  ? Glyma.12G108000 Secondary Identifier:  ? PAC:30545371
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G108000 0.5kb upstream 0.5kb upstream 5020 true Chr12: 9916611-9921630 Glycine max
Glyma.12G108000 0.5kb upstream 0.5kb upstream 500 false Chr12: 9916611-9917110 Glycine max
Glyma.12G108000 0.5kb downstream 0.5kb downstream 5020 true Chr12: 9917111-9922130 Glycine max
Glyma.12G108000 0.5kb downstream 0.5kb downstream 500 false Chr12: 9921631-9922130 Glycine max
Glyma.12G108000 1.0kb upstream 1.0kb upstream 5520 true Chr12: 9916111-9921630 Glycine max
Glyma.12G108000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9916111-9917110 Glycine max
Glyma.12G108000 1.0kb downstream 1.0kb downstream 5520 true Chr12: 9917111-9922630 Glycine max
Glyma.12G108000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9921631-9922630 Glycine max
Glyma.12G108000 2.0kb upstream 2.0kb upstream 6520 true Chr12: 9915111-9921630 Glycine max
Glyma.12G108000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9915111-9917110 Glycine max
Glyma.12G108000 2.0kb downstream 2.0kb downstream 6520 true Chr12: 9917111-9923630 Glycine max
Glyma.12G108000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9921631-9923630 Glycine max
Glyma.12G108000 5.0kb upstream 5.0kb upstream 9520 true Chr12: 9912111-9921630 Glycine max
Glyma.12G108000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9912111-9917110 Glycine max
Glyma.12G108000 5.0kb downstream 5.0kb downstream 9520 true Chr12: 9917111-9926630 Glycine max
Glyma.12G108000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9921631-9926630 Glycine max
Glyma.12G108000 10.0kb upstream 10.0kb upstream 14520 true Chr12: 9907111-9921630 Glycine max
Glyma.12G108000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9907111-9917110 Glycine max
Glyma.12G108000 10.0kb downstream 10.0kb downstream 14520 true Chr12: 9917111-9931630 Glycine max
Glyma.12G108000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9921631-9931630 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299051 5265 Fabidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9958 0.0 35.3157    
cufflinks 8.65552 0.0 24.3031   Low
cufflinks 7.45282 0.0 21.2573   Low
cufflinks 11.9865 0.0 32.7331    
cufflinks 24.3374 0.0 64.9312 High High
cufflinks 22.5475 0.0 60.1639    
cufflinks 30.5213 0.0 81.7127 High High
cufflinks 9.34027 0.0 25.991    
cufflinks 15.4112 0.0 41.4795    
cufflinks 2.696       Low
cufflinks 7.253     High  
cufflinks 3.374        
cufflinks 8.349     High High
cufflinks 9.222     High High
cufflinks 2.41       Low
cufflinks 3.831        
cufflinks 6.333     High  
cufflinks 3.447        
cufflinks 3.499        
cufflinks 3.169        
cufflinks 8.132     High High
cufflinks 3.153        
cufflinks 2.271       Low
cufflinks 8.643     High High
cufflinks 3.179        
cufflinks 6.609     High  

0 Strain