Gene : Glyma.12G092800 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.1.1.268 - 2-(R)-hydroxypropyl-CoM dehydrogenase / 2-(2-(R)-hydroxypropylthio)ethanesulfonate dehydrogenase Genomic Order:  928
Name:  ? Glyma.12G092800 Secondary Identifier:  ? PAC:30547502
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6990 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G092800 0.5kb upstream 0.5kb upstream 1700 true Chr12: 7588641-7590340 Glycine max
Glyma.12G092800 0.5kb upstream 0.5kb upstream 500 false Chr12: 7588641-7589140 Glycine max
Glyma.12G092800 0.5kb downstream 0.5kb downstream 1700 true Chr12: 7589141-7590840 Glycine max
Glyma.12G092800 0.5kb downstream 0.5kb downstream 500 false Chr12: 7590341-7590840 Glycine max
Glyma.12G092800 1.0kb upstream 1.0kb upstream 2200 true Chr12: 7588141-7590340 Glycine max
Glyma.12G092800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7588141-7589140 Glycine max
Glyma.12G092800 1.0kb downstream 1.0kb downstream 2200 true Chr12: 7589141-7591340 Glycine max
Glyma.12G092800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7590341-7591340 Glycine max
Glyma.12G092800 2.0kb upstream 2.0kb upstream 3200 true Chr12: 7587141-7590340 Glycine max
Glyma.12G092800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7587141-7589140 Glycine max
Glyma.12G092800 2.0kb downstream 2.0kb downstream 3200 true Chr12: 7589141-7592340 Glycine max
Glyma.12G092800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7590341-7592340 Glycine max
Glyma.12G092800 5.0kb upstream 5.0kb upstream 6200 true Chr12: 7584141-7590340 Glycine max
Glyma.12G092800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7584141-7589140 Glycine max
Glyma.12G092800 5.0kb downstream 5.0kb downstream 6200 true Chr12: 7589141-7595340 Glycine max
Glyma.12G092800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7590341-7595340 Glycine max
Glyma.12G092800 10.0kb upstream 10.0kb upstream 11200 true Chr12: 7579141-7590340 Glycine max
Glyma.12G092800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7579141-7589140 Glycine max
Glyma.12G092800 10.0kb downstream 10.0kb downstream 11200 true Chr12: 7589141-7600340 Glycine max
Glyma.12G092800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7590341-7600340 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298778 5265 Fabidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.2085 0.0 7.6357    
cufflinks 0.182079 0.0 0.719031 Low Low
cufflinks 14.3474 0.0 39.3625   High
cufflinks 30.3139 0.0 80.8738 High High
cufflinks 0.648132 0.0 2.426    
cufflinks 1.24362 0.0 4.49588    
cufflinks 2.86091 0.0 9.59848    
cufflinks 0.596694 0.0 2.24244    
cufflinks 0.684972 0.0 2.55797    
cufflinks 5.703       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.573     High High
cufflinks 0.133        
cufflinks 0.263        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.76        
cufflinks 0.163        
cufflinks 7.304     High High
cufflinks 0.045     Low Low
cufflinks 0.52        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.437        
cufflinks 3.705        
cufflinks 0.017     Low Low
cufflinks 1.245        
cufflinks 0.176        

0 Strain