Gene : Glyma.12G093200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33057:SF17 - GB Genomic Order:  932
Name:  ? Glyma.12G093200 Secondary Identifier:  ? PAC:30546093
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G093200 0.5kb upstream 0.5kb upstream 1088 true Chr12: 7629166-7630253 Glycine max
Glyma.12G093200 0.5kb upstream 0.5kb upstream 500 false Chr12: 7629754-7630253 Glycine max
Glyma.12G093200 0.5kb downstream 0.5kb downstream 1088 true Chr12: 7628666-7629753 Glycine max
Glyma.12G093200 0.5kb downstream 0.5kb downstream 500 false Chr12: 7628666-7629165 Glycine max
Glyma.12G093200 1.0kb upstream 1.0kb upstream 1588 true Chr12: 7629166-7630753 Glycine max
Glyma.12G093200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7629754-7630753 Glycine max
Glyma.12G093200 1.0kb downstream 1.0kb downstream 1588 true Chr12: 7628166-7629753 Glycine max
Glyma.12G093200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7628166-7629165 Glycine max
Glyma.12G093200 2.0kb upstream 2.0kb upstream 2588 true Chr12: 7629166-7631753 Glycine max
Glyma.12G093200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7629754-7631753 Glycine max
Glyma.12G093200 2.0kb downstream 2.0kb downstream 2588 true Chr12: 7627166-7629753 Glycine max
Glyma.12G093200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7627166-7629165 Glycine max
Glyma.12G093200 5.0kb upstream 5.0kb upstream 5588 true Chr12: 7629166-7634753 Glycine max
Glyma.12G093200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7629754-7634753 Glycine max
Glyma.12G093200 5.0kb downstream 5.0kb downstream 5588 true Chr12: 7624166-7629753 Glycine max
Glyma.12G093200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7624166-7629165 Glycine max
Glyma.12G093200 10.0kb upstream 10.0kb upstream 10588 true Chr12: 7629166-7639753 Glycine max
Glyma.12G093200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7629754-7639753 Glycine max
Glyma.12G093200 10.0kb downstream 10.0kb downstream 10588 true Chr12: 7619166-7629753 Glycine max
Glyma.12G093200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7619166-7629165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.825402 0.0 3.14541    
cufflinks 6.31269 0.0 20.7842   High
cufflinks 0.335289 0.0 1.32686    
cufflinks 1.34789 0.0 5.02031    
cufflinks 0.488288 0.0 1.90159    
cufflinks 1.50278 0.0 5.57872    
cufflinks 0.13292 0.0 0.545246 Low Low
cufflinks 3.13674 0.0 11.0614   High
cufflinks 0.978005 0.0 3.6988    
cufflinks 3.673       High
cufflinks 0.102       Low
cufflinks 0.642        
cufflinks 1.023        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.532        
cufflinks 0.4        
cufflinks 1.65        
cufflinks 11.51     High High
cufflinks 1.759        
cufflinks 0.227       Low
cufflinks 1.821        
cufflinks 1.458        
cufflinks 0.067       Low
cufflinks 1.813        
cufflinks 0.478        

0 Strain