Gene : Glyma.12G096000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31675:SF2 - AXIAL REGULATOR YABBY 2-RELATED Genomic Order:  960
Name:  ? Glyma.12G096000 Secondary Identifier:  ? PAC:30546087
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G096000 0.5kb upstream 0.5kb upstream 8906 true Chr12: 8080306-8089211 Glycine max
Glyma.12G096000 0.5kb upstream 0.5kb upstream 500 false Chr12: 8088712-8089211 Glycine max
Glyma.12G096000 0.5kb downstream 0.5kb downstream 8906 true Chr12: 8079806-8088711 Glycine max
Glyma.12G096000 0.5kb downstream 0.5kb downstream 500 false Chr12: 8079806-8080305 Glycine max
Glyma.12G096000 1.0kb upstream 1.0kb upstream 9406 true Chr12: 8080306-8089711 Glycine max
Glyma.12G096000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8088712-8089711 Glycine max
Glyma.12G096000 1.0kb downstream 1.0kb downstream 9406 true Chr12: 8079306-8088711 Glycine max
Glyma.12G096000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8079306-8080305 Glycine max
Glyma.12G096000 2.0kb upstream 2.0kb upstream 10406 true Chr12: 8080306-8090711 Glycine max
Glyma.12G096000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8088712-8090711 Glycine max
Glyma.12G096000 2.0kb downstream 2.0kb downstream 10406 true Chr12: 8078306-8088711 Glycine max
Glyma.12G096000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8078306-8080305 Glycine max
Glyma.12G096000 5.0kb upstream 5.0kb upstream 13406 true Chr12: 8080306-8093711 Glycine max
Glyma.12G096000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8088712-8093711 Glycine max
Glyma.12G096000 5.0kb downstream 5.0kb downstream 13406 true Chr12: 8075306-8088711 Glycine max
Glyma.12G096000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8075306-8080305 Glycine max
Glyma.12G096000 10.0kb upstream 10.0kb upstream 18406 true Chr12: 8080306-8098711 Glycine max
Glyma.12G096000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8088712-8098711 Glycine max
Glyma.12G096000 10.0kb downstream 10.0kb downstream 18406 true Chr12: 8070306-8088711 Glycine max
Glyma.12G096000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8070306-8080305 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310531 5265 Fabidae View MSA
124068097 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.0583 0.0 98.6627 High  
cufflinks 32.0055 0.0 97.7589 High  
cufflinks 44.656 0.0 146.47 High  
cufflinks 63.6603 0.0 210.956 High  
cufflinks 0.252555 0.0 1.85113   Low
cufflinks 3.33814 0.0 17.2932    
cufflinks 18.9051 0.0 62.6757    
cufflinks 2.2766 0.0 12.9464    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.045     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.549        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.592        
cufflinks 0.001     Low Low
cufflinks 1.615        
cufflinks 1.495        
cufflinks 2.522        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.49        
cufflinks 2.088        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.365        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain