Gene : Glyma.12G096100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23389:SF10 - REPLICATION FACTOR C SUBUNIT 1 Genomic Order:  961
Name:  ? Glyma.12G096100 Secondary Identifier:  ? PAC:30548455
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G096100 0.5kb upstream 0.5kb upstream 10373 true Chr12: 8100997-8111369 Glycine max
Glyma.12G096100 0.5kb upstream 0.5kb upstream 500 false Chr12: 8100997-8101496 Glycine max
Glyma.12G096100 0.5kb downstream 0.5kb downstream 10373 true Chr12: 8101497-8111869 Glycine max
Glyma.12G096100 0.5kb downstream 0.5kb downstream 500 false Chr12: 8111370-8111869 Glycine max
Glyma.12G096100 1.0kb upstream 1.0kb upstream 10873 true Chr12: 8100497-8111369 Glycine max
Glyma.12G096100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8100497-8101496 Glycine max
Glyma.12G096100 1.0kb downstream 1.0kb downstream 10873 true Chr12: 8101497-8112369 Glycine max
Glyma.12G096100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8111370-8112369 Glycine max
Glyma.12G096100 2.0kb upstream 2.0kb upstream 11873 true Chr12: 8099497-8111369 Glycine max
Glyma.12G096100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8099497-8101496 Glycine max
Glyma.12G096100 2.0kb downstream 2.0kb downstream 11873 true Chr12: 8101497-8113369 Glycine max
Glyma.12G096100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8111370-8113369 Glycine max
Glyma.12G096100 5.0kb upstream 5.0kb upstream 14873 true Chr12: 8096497-8111369 Glycine max
Glyma.12G096100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8096497-8101496 Glycine max
Glyma.12G096100 5.0kb downstream 5.0kb downstream 14873 true Chr12: 8101497-8116369 Glycine max
Glyma.12G096100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8111370-8116369 Glycine max
Glyma.12G096100 10.0kb upstream 10.0kb upstream 19873 true Chr12: 8091497-8111369 Glycine max
Glyma.12G096100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8091497-8101496 Glycine max
Glyma.12G096100 10.0kb downstream 10.0kb downstream 19873 true Chr12: 8101497-8121369 Glycine max
Glyma.12G096100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8111370-8121369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041518 5273 Angiosperm View MSA
122308104 5265 Fabidae View MSA
124066049 5270 Rosid View MSA
123746949 5271 Pentapetalae View MSA
122789448 5272 Eudicot View MSA
121345302 5274 Embryophyte View MSA
123425414 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.78179 0.0 5.86057   Low
cufflinks 6.34701 0.0 18.9828   High
cufflinks 2.49968 0.0 8.51258    
cufflinks 3.60649 0.0 11.1343    
cufflinks 2.69569 0.0 9.12098    
cufflinks 2.86498 0.0 9.58301    
cufflinks 7.85296 0.0 23.3312   High
cufflinks 2.92097 0.0 9.62255    
cufflinks 2.22622 0.0 7.89937    
cufflinks 1.313        
cufflinks 0.265       Low
cufflinks 1.527        
cufflinks 1.645        
cufflinks 1.876        
cufflinks 0.608        
cufflinks 2.049        
cufflinks 0.651        
cufflinks 1.87        
cufflinks 3.936       High
cufflinks 1.686        
cufflinks 0.467       Low
cufflinks 2.052        
cufflinks 2.47        
cufflinks 0.341       Low
cufflinks 1.728        
cufflinks 0.521       Low

0 Strain