Gene : Glyma.12G097500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12701:SF18 - 4D656-RELATED Genomic Order:  975
Name:  ? Glyma.12G097500 Secondary Identifier:  ? PAC:30547750
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G097500 0.5kb upstream 0.5kb upstream 4291 true Chr12: 8347462-8351752 Glycine max
Glyma.12G097500 0.5kb upstream 0.5kb upstream 500 false Chr12: 8351253-8351752 Glycine max
Glyma.12G097500 0.5kb downstream 0.5kb downstream 4291 true Chr12: 8346962-8351252 Glycine max
Glyma.12G097500 0.5kb downstream 0.5kb downstream 500 false Chr12: 8346962-8347461 Glycine max
Glyma.12G097500 1.0kb upstream 1.0kb upstream 4791 true Chr12: 8347462-8352252 Glycine max
Glyma.12G097500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8351253-8352252 Glycine max
Glyma.12G097500 1.0kb downstream 1.0kb downstream 4791 true Chr12: 8346462-8351252 Glycine max
Glyma.12G097500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8346462-8347461 Glycine max
Glyma.12G097500 2.0kb upstream 2.0kb upstream 5791 true Chr12: 8347462-8353252 Glycine max
Glyma.12G097500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8351253-8353252 Glycine max
Glyma.12G097500 2.0kb downstream 2.0kb downstream 5791 true Chr12: 8345462-8351252 Glycine max
Glyma.12G097500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8345462-8347461 Glycine max
Glyma.12G097500 5.0kb upstream 5.0kb upstream 8791 true Chr12: 8347462-8356252 Glycine max
Glyma.12G097500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8351253-8356252 Glycine max
Glyma.12G097500 5.0kb downstream 5.0kb downstream 8791 true Chr12: 8342462-8351252 Glycine max
Glyma.12G097500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8342462-8347461 Glycine max
Glyma.12G097500 10.0kb upstream 10.0kb upstream 13791 true Chr12: 8347462-8361252 Glycine max
Glyma.12G097500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8351253-8361252 Glycine max
Glyma.12G097500 10.0kb downstream 10.0kb downstream 13791 true Chr12: 8337462-8351252 Glycine max
Glyma.12G097500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8337462-8347461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311093 5265 Fabidae View MSA
124069525 5270 Rosid View MSA
123738929 5271 Pentapetalae View MSA
122789620 5272 Eudicot View MSA
122043200 5273 Angiosperm View MSA
121347866 5274 Embryophyte View MSA
123426905 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2932 0.0 31.7974    
cufflinks 7.93231 0.0 23.2487    
cufflinks 8.84992 0.0 25.6298    
cufflinks 11.6732 0.0 32.7199    
cufflinks 7.2497 0.0 21.5164   Low
cufflinks 19.559 0.0 52.7894   High
cufflinks 11.7332 0.0 32.952    
cufflinks 9.9206 0.0 28.2421    
cufflinks 7.00669 0.0 20.854   Low
cufflinks 2.323        
cufflinks 2.358        
cufflinks 1.778        
cufflinks 2.924        
cufflinks 1.902        
cufflinks 1.227       Low
cufflinks 1.895        
cufflinks 3.965       High
cufflinks 1.875        
cufflinks 1.997        
cufflinks 1.908        
cufflinks 3.251       High
cufflinks 1.979        
cufflinks 2.012        
cufflinks 3.408       High
cufflinks 1.526       Low
cufflinks 4.039       High

0 Strain