Gene : Glyma.12G098200 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease Genomic Order:  982
Name:  ? Glyma.12G098200 Secondary Identifier:  ? PAC:30546120
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G098200 0.5kb upstream 0.5kb upstream 4931 true Chr12: 8451563-8456493 Glycine max
Glyma.12G098200 0.5kb upstream 0.5kb upstream 500 false Chr12: 8451563-8452062 Glycine max
Glyma.12G098200 0.5kb downstream 0.5kb downstream 4931 true Chr12: 8452063-8456993 Glycine max
Glyma.12G098200 0.5kb downstream 0.5kb downstream 500 false Chr12: 8456494-8456993 Glycine max
Glyma.12G098200 1.0kb upstream 1.0kb upstream 5431 true Chr12: 8451063-8456493 Glycine max
Glyma.12G098200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8451063-8452062 Glycine max
Glyma.12G098200 1.0kb downstream 1.0kb downstream 5431 true Chr12: 8452063-8457493 Glycine max
Glyma.12G098200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8456494-8457493 Glycine max
Glyma.12G098200 2.0kb upstream 2.0kb upstream 6431 true Chr12: 8450063-8456493 Glycine max
Glyma.12G098200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8450063-8452062 Glycine max
Glyma.12G098200 2.0kb downstream 2.0kb downstream 6431 true Chr12: 8452063-8458493 Glycine max
Glyma.12G098200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8456494-8458493 Glycine max
Glyma.12G098200 5.0kb upstream 5.0kb upstream 9431 true Chr12: 8447063-8456493 Glycine max
Glyma.12G098200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8447063-8452062 Glycine max
Glyma.12G098200 5.0kb downstream 5.0kb downstream 9431 true Chr12: 8452063-8461493 Glycine max
Glyma.12G098200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8456494-8461493 Glycine max
Glyma.12G098200 10.0kb upstream 10.0kb upstream 14431 true Chr12: 8442063-8456493 Glycine max
Glyma.12G098200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8442063-8452062 Glycine max
Glyma.12G098200 10.0kb downstream 10.0kb downstream 14431 true Chr12: 8452063-8466493 Glycine max
Glyma.12G098200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8456494-8466493 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301183 5265 Fabidae View MSA
124063019 5270 Rosid View MSA
123739273 5271 Pentapetalae View MSA
122788607 5272 Eudicot View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1832 0.0 48.6229   High
cufflinks 7.39157 0.0 20.194    
cufflinks 7.945 0.0 21.5516    
cufflinks 4.25771 0.0 12.2548    
cufflinks 1.54129 0.0 5.11676   Low
cufflinks 1.7899 0.0 5.80276    
cufflinks 3.61052 0.0 10.6352    
cufflinks 2.22521 0.0 7.0062    
cufflinks 1.74843 0.0 5.68955    
cufflinks 1.868        
cufflinks 1.34        
cufflinks 2.994        
cufflinks 0.408       Low
cufflinks 0.416       Low
cufflinks 1.147        
cufflinks 7.706     High High
cufflinks 0.269       Low
cufflinks 2.561        
cufflinks 3.112        
cufflinks 8.376     High High
cufflinks 0.804        
cufflinks 8.974     High High
cufflinks 9.206     High High
cufflinks 1.664        
cufflinks 8.31     High High
cufflinks 0.444       Low

0 Strain