Gene : Glyma.12G098600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  986
Name:  ? Glyma.12G098600 Secondary Identifier:  ? PAC:30546527
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G098600 0.5kb upstream 0.5kb upstream 5558 true Chr12: 8486135-8491692 Glycine max
Glyma.12G098600 0.5kb upstream 0.5kb upstream 500 false Chr12: 8491193-8491692 Glycine max
Glyma.12G098600 0.5kb downstream 0.5kb downstream 5558 true Chr12: 8485635-8491192 Glycine max
Glyma.12G098600 0.5kb downstream 0.5kb downstream 500 false Chr12: 8485635-8486134 Glycine max
Glyma.12G098600 1.0kb upstream 1.0kb upstream 6058 true Chr12: 8486135-8492192 Glycine max
Glyma.12G098600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8491193-8492192 Glycine max
Glyma.12G098600 1.0kb downstream 1.0kb downstream 6058 true Chr12: 8485135-8491192 Glycine max
Glyma.12G098600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8485135-8486134 Glycine max
Glyma.12G098600 2.0kb upstream 2.0kb upstream 7058 true Chr12: 8486135-8493192 Glycine max
Glyma.12G098600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8491193-8493192 Glycine max
Glyma.12G098600 2.0kb downstream 2.0kb downstream 7058 true Chr12: 8484135-8491192 Glycine max
Glyma.12G098600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8484135-8486134 Glycine max
Glyma.12G098600 5.0kb upstream 5.0kb upstream 10058 true Chr12: 8486135-8496192 Glycine max
Glyma.12G098600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8491193-8496192 Glycine max
Glyma.12G098600 5.0kb downstream 5.0kb downstream 10058 true Chr12: 8481135-8491192 Glycine max
Glyma.12G098600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8481135-8486134 Glycine max
Glyma.12G098600 10.0kb upstream 10.0kb upstream 15058 true Chr12: 8486135-8501192 Glycine max
Glyma.12G098600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8491193-8501192 Glycine max
Glyma.12G098600 10.0kb downstream 10.0kb downstream 15058 true Chr12: 8476135-8491192 Glycine max
Glyma.12G098600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8476135-8486134 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309134 5265 Fabidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10702 0.0 14.2698    
cufflinks 9.59425 0.0 25.7384    
cufflinks 2.52322 0.0 7.65822   Low
cufflinks 7.68418 0.0 20.7984    
cufflinks 13.1595 0.0 35.1097    
cufflinks 13.8091 0.0 36.8429    
cufflinks 3.63491 0.0 10.5842   Low
cufflinks 17.6545 0.0 47.3033   High
cufflinks 9.30945 0.0 25.0054    
cufflinks 10.462     High High
cufflinks 3.039        
cufflinks 2.961        
cufflinks 10.527     High High
cufflinks 8.478     High  
cufflinks 1.271       Low
cufflinks 5.929        
cufflinks 6.194     High  
cufflinks 11.261     High High
cufflinks 6.725        
cufflinks 4.231        
cufflinks 2.581       Low
cufflinks 5.644        
cufflinks 5.952        
cufflinks 1.92       Low
cufflinks 5.284        
cufflinks 4.232        

0 Strain