Gene : Glyma.12G085800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10792:SF8 - RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  858
Name:  ? Glyma.12G085800 Secondary Identifier:  ? PAC:30546355
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G085800 0.5kb upstream 0.5kb upstream 4159 true Chr12: 6923224-6927382 Glycine max
Glyma.12G085800 0.5kb upstream 0.5kb upstream 500 false Chr12: 6923224-6923723 Glycine max
Glyma.12G085800 0.5kb downstream 0.5kb downstream 4159 true Chr12: 6923724-6927882 Glycine max
Glyma.12G085800 0.5kb downstream 0.5kb downstream 500 false Chr12: 6927383-6927882 Glycine max
Glyma.12G085800 1.0kb upstream 1.0kb upstream 4659 true Chr12: 6922724-6927382 Glycine max
Glyma.12G085800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6922724-6923723 Glycine max
Glyma.12G085800 1.0kb downstream 1.0kb downstream 4659 true Chr12: 6923724-6928382 Glycine max
Glyma.12G085800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6927383-6928382 Glycine max
Glyma.12G085800 2.0kb upstream 2.0kb upstream 5659 true Chr12: 6921724-6927382 Glycine max
Glyma.12G085800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6921724-6923723 Glycine max
Glyma.12G085800 2.0kb downstream 2.0kb downstream 5659 true Chr12: 6923724-6929382 Glycine max
Glyma.12G085800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6927383-6929382 Glycine max
Glyma.12G085800 5.0kb upstream 5.0kb upstream 8659 true Chr12: 6918724-6927382 Glycine max
Glyma.12G085800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6918724-6923723 Glycine max
Glyma.12G085800 5.0kb downstream 5.0kb downstream 8659 true Chr12: 6923724-6932382 Glycine max
Glyma.12G085800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6927383-6932382 Glycine max
Glyma.12G085800 10.0kb upstream 10.0kb upstream 13659 true Chr12: 6913724-6927382 Glycine max
Glyma.12G085800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6913724-6923723 Glycine max
Glyma.12G085800 10.0kb downstream 10.0kb downstream 13659 true Chr12: 6923724-6937382 Glycine max
Glyma.12G085800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6927383-6937382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250115 5265 Fabidae View MSA
124060903 5270 Rosid View MSA
123737225 5271 Pentapetalae View MSA
122786716 5272 Eudicot View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.41092 0.0 24.0499   High
cufflinks 2.97929 0.0 13.8249   Low
cufflinks 2.45099 0.0 9.19678   Low
cufflinks 3.80045 0.0 12.6482    
cufflinks 5.83688 0.0 21.935    
cufflinks 6.12218 0.0 22.7169   High
cufflinks 5.50259 0.0 16.5583    
cufflinks 3.53377 0.0 11.857    
cufflinks 3.96733 0.0 16.8354    
cufflinks 0.607        
cufflinks 0.423        
cufflinks 0.656        
cufflinks 1.273       High
cufflinks 1.924       High
cufflinks 0.444        
cufflinks 0.345        
cufflinks 0.458        
cufflinks 0.602        
cufflinks 0.527        
cufflinks 0.324       Low
cufflinks 0.688        
cufflinks 0.34        
cufflinks 0.326       Low
cufflinks 0.711        
cufflinks 0.324       Low
cufflinks 0.461        

0 Strain