Gene : Glyma.12G086500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF4 - NTKL-BINDING PROTEIN 1 Genomic Order:  865
Name:  ? Glyma.12G086500 Secondary Identifier:  ? PAC:30549003
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G086500 0.5kb upstream 0.5kb upstream 3467 true Chr12: 6996398-6999864 Glycine max
Glyma.12G086500 0.5kb upstream 0.5kb upstream 500 false Chr12: 6999365-6999864 Glycine max
Glyma.12G086500 0.5kb downstream 0.5kb downstream 3467 true Chr12: 6995898-6999364 Glycine max
Glyma.12G086500 0.5kb downstream 0.5kb downstream 500 false Chr12: 6995898-6996397 Glycine max
Glyma.12G086500 1.0kb upstream 1.0kb upstream 3967 true Chr12: 6996398-7000364 Glycine max
Glyma.12G086500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6999365-7000364 Glycine max
Glyma.12G086500 1.0kb downstream 1.0kb downstream 3967 true Chr12: 6995398-6999364 Glycine max
Glyma.12G086500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6995398-6996397 Glycine max
Glyma.12G086500 2.0kb upstream 2.0kb upstream 4967 true Chr12: 6996398-7001364 Glycine max
Glyma.12G086500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6999365-7001364 Glycine max
Glyma.12G086500 2.0kb downstream 2.0kb downstream 4967 true Chr12: 6994398-6999364 Glycine max
Glyma.12G086500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6994398-6996397 Glycine max
Glyma.12G086500 5.0kb upstream 5.0kb upstream 7967 true Chr12: 6996398-7004364 Glycine max
Glyma.12G086500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6999365-7004364 Glycine max
Glyma.12G086500 5.0kb downstream 5.0kb downstream 7967 true Chr12: 6991398-6999364 Glycine max
Glyma.12G086500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6991398-6996397 Glycine max
Glyma.12G086500 10.0kb upstream 10.0kb upstream 12967 true Chr12: 6996398-7009364 Glycine max
Glyma.12G086500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6999365-7009364 Glycine max
Glyma.12G086500 10.0kb downstream 10.0kb downstream 12967 true Chr12: 6986398-6999364 Glycine max
Glyma.12G086500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6986398-6996397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308285 5265 Fabidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.372884 0.0 1.40612   Low
cufflinks 7.96149 0.0 22.1839   High
cufflinks 0.468819 0.0 1.74504   Low
cufflinks 1.7851 0.0 6.02395    
cufflinks 1.80801 0.0 6.12465    
cufflinks 2.20631 0.0 7.30015    
cufflinks 0.499877 0.0 1.85971   Low
cufflinks 7.26672 0.0 20.4067   High
cufflinks 2.64118 0.0 8.50269    
cufflinks 2.173       High
cufflinks 0.272       Low
cufflinks 0.459        
cufflinks 2.998       High
cufflinks 1.127        
cufflinks 0.12       Low
cufflinks 1.339        
cufflinks 0.687        
cufflinks 1.034        
cufflinks 3.426       High
cufflinks 0.937        
cufflinks 0.474        
cufflinks 1.189        
cufflinks 0.941        
cufflinks 0.273       Low
cufflinks 1.169        
cufflinks 0.787        

0 Strain