Gene : Glyma.12G087000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10670 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A Genomic Order:  870
Name:  ? Glyma.12G087000 Secondary Identifier:  ? PAC:30547584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G087000 0.5kb upstream 0.5kb upstream 23602 true Chr12: 7032052-7055653 Glycine max
Glyma.12G087000 0.5kb upstream 0.5kb upstream 500 false Chr12: 7032052-7032551 Glycine max
Glyma.12G087000 0.5kb downstream 0.5kb downstream 23602 true Chr12: 7032552-7056153 Glycine max
Glyma.12G087000 0.5kb downstream 0.5kb downstream 500 false Chr12: 7055654-7056153 Glycine max
Glyma.12G087000 1.0kb upstream 1.0kb upstream 24102 true Chr12: 7031552-7055653 Glycine max
Glyma.12G087000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7031552-7032551 Glycine max
Glyma.12G087000 1.0kb downstream 1.0kb downstream 24102 true Chr12: 7032552-7056653 Glycine max
Glyma.12G087000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7055654-7056653 Glycine max
Glyma.12G087000 2.0kb upstream 2.0kb upstream 25102 true Chr12: 7030552-7055653 Glycine max
Glyma.12G087000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7030552-7032551 Glycine max
Glyma.12G087000 2.0kb downstream 2.0kb downstream 25102 true Chr12: 7032552-7057653 Glycine max
Glyma.12G087000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7055654-7057653 Glycine max
Glyma.12G087000 5.0kb upstream 5.0kb upstream 28102 true Chr12: 7027552-7055653 Glycine max
Glyma.12G087000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7027552-7032551 Glycine max
Glyma.12G087000 5.0kb downstream 5.0kb downstream 28102 true Chr12: 7032552-7060653 Glycine max
Glyma.12G087000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7055654-7060653 Glycine max
Glyma.12G087000 10.0kb upstream 10.0kb upstream 33102 true Chr12: 7022552-7055653 Glycine max
Glyma.12G087000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7022552-7032551 Glycine max
Glyma.12G087000 10.0kb downstream 10.0kb downstream 33102 true Chr12: 7032552-7065653 Glycine max
Glyma.12G087000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7055654-7065653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309265 5265 Fabidae View MSA
124064843 5270 Rosid View MSA
123747038 5271 Pentapetalae View MSA
122788232 5272 Eudicot View MSA
122046610 5273 Angiosperm View MSA
121345888 5274 Embryophyte View MSA
123425547 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.563072 0.0 1.8071   Low
cufflinks 6.3028 0.0 16.9622   High
cufflinks 1.23616 0.0 3.54153    
cufflinks 2.7635 0.0 7.4363    
cufflinks 5.41437 0.0 14.4844   High
cufflinks 1.90879 0.0 5.25686    
cufflinks 3.45995 0.0 9.25424    
cufflinks 2.00406 0.0 5.49366    
cufflinks 3.52341 0.0 9.41539    
cufflinks 1.42        
cufflinks 0.329       Low
cufflinks 1.097        
cufflinks 2.138       High
cufflinks 2.883       High
cufflinks 0.866        
cufflinks 1.413        
cufflinks 0.541        
cufflinks 0.94        
cufflinks 3.776       High
cufflinks 0.967        
cufflinks 0.525       Low
cufflinks 1.171        
cufflinks 2.016        
cufflinks 0.368       Low
cufflinks 1.042        
cufflinks 0.729        

0 Strain