Gene : Glyma.12G087300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11353:SF23 - T-COMPLEX PROTEIN 1 SUBUNIT BETA Genomic Order:  873
Name:  ? Glyma.12G087300 Secondary Identifier:  ? PAC:30545401
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G087300 0.5kb upstream 0.5kb upstream 8196 true Chr12: 7110564-7118759 Glycine max
Glyma.12G087300 0.5kb upstream 0.5kb upstream 500 false Chr12: 7110564-7111063 Glycine max
Glyma.12G087300 0.5kb downstream 0.5kb downstream 8196 true Chr12: 7111064-7119259 Glycine max
Glyma.12G087300 0.5kb downstream 0.5kb downstream 500 false Chr12: 7118760-7119259 Glycine max
Glyma.12G087300 1.0kb upstream 1.0kb upstream 8696 true Chr12: 7110064-7118759 Glycine max
Glyma.12G087300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7110064-7111063 Glycine max
Glyma.12G087300 1.0kb downstream 1.0kb downstream 8696 true Chr12: 7111064-7119759 Glycine max
Glyma.12G087300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7118760-7119759 Glycine max
Glyma.12G087300 2.0kb upstream 2.0kb upstream 9696 true Chr12: 7109064-7118759 Glycine max
Glyma.12G087300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7109064-7111063 Glycine max
Glyma.12G087300 2.0kb downstream 2.0kb downstream 9696 true Chr12: 7111064-7120759 Glycine max
Glyma.12G087300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7118760-7120759 Glycine max
Glyma.12G087300 5.0kb upstream 5.0kb upstream 12696 true Chr12: 7106064-7118759 Glycine max
Glyma.12G087300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7106064-7111063 Glycine max
Glyma.12G087300 5.0kb downstream 5.0kb downstream 12696 true Chr12: 7111064-7123759 Glycine max
Glyma.12G087300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7118760-7123759 Glycine max
Glyma.12G087300 10.0kb upstream 10.0kb upstream 17696 true Chr12: 7101064-7118759 Glycine max
Glyma.12G087300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7101064-7111063 Glycine max
Glyma.12G087300 10.0kb downstream 10.0kb downstream 17696 true Chr12: 7111064-7128759 Glycine max
Glyma.12G087300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7118760-7128759 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315025 5265 Fabidae View MSA
124064073 5270 Rosid View MSA
123747286 5271 Pentapetalae View MSA
122790745 5272 Eudicot View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.3068 0.0 172.993 High  
cufflinks 60.9135 0.0 181.817 High  
cufflinks 29.6938 0.0 81.6442 High Low
cufflinks 52.7715 0.0 154.523 High  
cufflinks 81.9448 0.0 257.062 High High
cufflinks 55.485 0.0 163.529 High  
cufflinks 61.7024 0.0 184.291 High  
cufflinks 59.247 0.0 176.37 High  
cufflinks 60.6804 0.0 181.225 High  
cufflinks 15.766     High  
cufflinks 5.902     High Low
cufflinks 11.888     High  
cufflinks 31.15     High High
cufflinks 41.907     High High
cufflinks 6.983     High Low
cufflinks 11.338     High  
cufflinks 9.329     High  
cufflinks 11.947     High  
cufflinks 20.222     High High
cufflinks 8.493     High  
cufflinks 8.958     High  
cufflinks 9.578     High  
cufflinks 13.417     High  
cufflinks 7.173     High  
cufflinks 10.617     High  
cufflinks 11.402     High  

0 Strain