Gene : Glyma.12G089400 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0870 - DNA polymerase epsilon, subunit D Genomic Order:  894
Name:  ? Glyma.12G089400 Secondary Identifier:  ? PAC:30547186
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G089400 0.5kb upstream 0.5kb upstream 1613 true Chr12: 7349651-7351263 Glycine max
Glyma.12G089400 0.5kb upstream 0.5kb upstream 500 false Chr12: 7349651-7350150 Glycine max
Glyma.12G089400 0.5kb downstream 0.5kb downstream 1613 true Chr12: 7350151-7351763 Glycine max
Glyma.12G089400 0.5kb downstream 0.5kb downstream 500 false Chr12: 7351264-7351763 Glycine max
Glyma.12G089400 1.0kb upstream 1.0kb upstream 2113 true Chr12: 7349151-7351263 Glycine max
Glyma.12G089400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7349151-7350150 Glycine max
Glyma.12G089400 1.0kb downstream 1.0kb downstream 2113 true Chr12: 7350151-7352263 Glycine max
Glyma.12G089400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7351264-7352263 Glycine max
Glyma.12G089400 2.0kb upstream 2.0kb upstream 3113 true Chr12: 7348151-7351263 Glycine max
Glyma.12G089400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7348151-7350150 Glycine max
Glyma.12G089400 2.0kb downstream 2.0kb downstream 3113 true Chr12: 7350151-7353263 Glycine max
Glyma.12G089400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7351264-7353263 Glycine max
Glyma.12G089400 5.0kb upstream 5.0kb upstream 6113 true Chr12: 7345151-7351263 Glycine max
Glyma.12G089400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7345151-7350150 Glycine max
Glyma.12G089400 5.0kb downstream 5.0kb downstream 6113 true Chr12: 7350151-7356263 Glycine max
Glyma.12G089400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7351264-7356263 Glycine max
Glyma.12G089400 10.0kb upstream 10.0kb upstream 11113 true Chr12: 7340151-7351263 Glycine max
Glyma.12G089400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7340151-7350150 Glycine max
Glyma.12G089400 10.0kb downstream 10.0kb downstream 11113 true Chr12: 7350151-7361263 Glycine max
Glyma.12G089400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7351264-7361263 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299729 5265 Fabidae View MSA
124065449 5270 Rosid View MSA
123742361 5271 Pentapetalae View MSA
122794947 5272 Eudicot View MSA
122048157 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121348277 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.141        
cufflinks 0.033     Low Low
cufflinks 0.114     Low  
cufflinks 0.226       High
cufflinks 0.284       High
cufflinks 0.017     Low Low
cufflinks 0.132        
cufflinks 0.039     Low  
cufflinks 0.077     Low  
cufflinks 0.218       High
cufflinks 0.052     Low  
cufflinks 0.057     Low  
cufflinks 0.06     Low  
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157        
cufflinks 0.026     Low Low

0 Strain