Gene : Glyma.12G089800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10891:SF290 - CALCIUM-BINDING PROTEIN CML18-RELATED Genomic Order:  898
Name:  ? Glyma.12G089800 Secondary Identifier:  ? PAC:30547051
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G089800 0.5kb upstream 0.5kb upstream 1480 true Chr12: 7377082-7378561 Glycine max
Glyma.12G089800 0.5kb upstream 0.5kb upstream 500 false Chr12: 7377082-7377581 Glycine max
Glyma.12G089800 0.5kb downstream 0.5kb downstream 1480 true Chr12: 7377582-7379061 Glycine max
Glyma.12G089800 0.5kb downstream 0.5kb downstream 500 false Chr12: 7378562-7379061 Glycine max
Glyma.12G089800 1.0kb upstream 1.0kb upstream 1980 true Chr12: 7376582-7378561 Glycine max
Glyma.12G089800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7376582-7377581 Glycine max
Glyma.12G089800 1.0kb downstream 1.0kb downstream 1980 true Chr12: 7377582-7379561 Glycine max
Glyma.12G089800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7378562-7379561 Glycine max
Glyma.12G089800 2.0kb upstream 2.0kb upstream 2980 true Chr12: 7375582-7378561 Glycine max
Glyma.12G089800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7375582-7377581 Glycine max
Glyma.12G089800 2.0kb downstream 2.0kb downstream 2980 true Chr12: 7377582-7380561 Glycine max
Glyma.12G089800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7378562-7380561 Glycine max
Glyma.12G089800 5.0kb upstream 5.0kb upstream 5980 true Chr12: 7372582-7378561 Glycine max
Glyma.12G089800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7372582-7377581 Glycine max
Glyma.12G089800 5.0kb downstream 5.0kb downstream 5980 true Chr12: 7377582-7383561 Glycine max
Glyma.12G089800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7378562-7383561 Glycine max
Glyma.12G089800 10.0kb upstream 10.0kb upstream 10980 true Chr12: 7367582-7378561 Glycine max
Glyma.12G089800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7367582-7377581 Glycine max
Glyma.12G089800 10.0kb downstream 10.0kb downstream 10980 true Chr12: 7377582-7388561 Glycine max
Glyma.12G089800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7378562-7388561 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304885 5265 Fabidae View MSA
124071205 5270 Rosid View MSA
123741143 5271 Pentapetalae View MSA
122785978 5272 Eudicot View MSA
122047727 5273 Angiosperm View MSA
121350745 5274 Embryophyte View MSA
123381869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.998357 0.0 3.66977    
cufflinks 0.132471 0.0 0.530924 Low  
cufflinks 0.0440759 0.0 0.188585 Low Low
cufflinks 0.196121 0.0 0.77459    
cufflinks 1.45503 0.0 5.21023    
cufflinks 26.6823 0.0 71.3077 High High
cufflinks 0.0958936 0.0 0.388985 Low  
cufflinks 2.06545 0.0 7.23003    
cufflinks 2.08212 0.0 7.27084    
cufflinks 1.779        
cufflinks 0.976        
cufflinks 0.98        
cufflinks 4.387       High
cufflinks 2.554        
cufflinks 0.135       Low
cufflinks 0.498        
cufflinks 7.152     High High
cufflinks 3.228       High
cufflinks 0.109       Low
cufflinks 0.288        
cufflinks 0.836        
cufflinks 0.409        
cufflinks 0.618        
cufflinks 0.595        
cufflinks 0.49        
cufflinks 1.565        

0 Strain