Gene : Glyma.12G090100 G. max Wm82.a2.v1
Defline:  (1 of 24) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  901
Name:  ? Glyma.12G090100 Secondary Identifier:  ? PAC:30545681
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G090100 0.5kb upstream 0.5kb upstream 1163 true Chr12: 7397838-7399000 Glycine max
Glyma.12G090100 0.5kb upstream 0.5kb upstream 500 false Chr12: 7397838-7398337 Glycine max
Glyma.12G090100 0.5kb downstream 0.5kb downstream 1163 true Chr12: 7398338-7399500 Glycine max
Glyma.12G090100 0.5kb downstream 0.5kb downstream 500 false Chr12: 7399001-7399500 Glycine max
Glyma.12G090100 1.0kb upstream 1.0kb upstream 1663 true Chr12: 7397338-7399000 Glycine max
Glyma.12G090100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7397338-7398337 Glycine max
Glyma.12G090100 1.0kb downstream 1.0kb downstream 1663 true Chr12: 7398338-7400000 Glycine max
Glyma.12G090100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7399001-7400000 Glycine max
Glyma.12G090100 2.0kb upstream 2.0kb upstream 2663 true Chr12: 7396338-7399000 Glycine max
Glyma.12G090100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7396338-7398337 Glycine max
Glyma.12G090100 2.0kb downstream 2.0kb downstream 2663 true Chr12: 7398338-7401000 Glycine max
Glyma.12G090100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7399001-7401000 Glycine max
Glyma.12G090100 5.0kb upstream 5.0kb upstream 5663 true Chr12: 7393338-7399000 Glycine max
Glyma.12G090100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7393338-7398337 Glycine max
Glyma.12G090100 5.0kb downstream 5.0kb downstream 5663 true Chr12: 7398338-7404000 Glycine max
Glyma.12G090100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7399001-7404000 Glycine max
Glyma.12G090100 10.0kb upstream 10.0kb upstream 10663 true Chr12: 7388338-7399000 Glycine max
Glyma.12G090100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7388338-7398337 Glycine max
Glyma.12G090100 10.0kb downstream 10.0kb downstream 10663 true Chr12: 7398338-7409000 Glycine max
Glyma.12G090100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7399001-7409000 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250616 5265 Fabidae View MSA
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06403 0.0 13.8725   High
cufflinks 0.0648528 0.0 0.277007 Low  
cufflinks 0.25329 0.0 1.00522    
cufflinks 0.0180328 0.0 0.0867021 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low Low
cufflinks 1.944        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.325        
cufflinks 0.046     Low Low
cufflinks 3.337        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.658        
cufflinks 2.7        
cufflinks 0.083       Low
cufflinks 2.973        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain