Gene : Glyma.12G079500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22814:SF100 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  795
Name:  ? Glyma.12G079500 Secondary Identifier:  ? PAC:30546373
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G079500 0.5kb upstream 0.5kb upstream 2724 true Chr12: 6214402-6217125 Glycine max
Glyma.12G079500 0.5kb upstream 0.5kb upstream 500 false Chr12: 6216626-6217125 Glycine max
Glyma.12G079500 0.5kb downstream 0.5kb downstream 2724 true Chr12: 6213902-6216625 Glycine max
Glyma.12G079500 0.5kb downstream 0.5kb downstream 500 false Chr12: 6213902-6214401 Glycine max
Glyma.12G079500 1.0kb upstream 1.0kb upstream 3224 true Chr12: 6214402-6217625 Glycine max
Glyma.12G079500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6216626-6217625 Glycine max
Glyma.12G079500 1.0kb downstream 1.0kb downstream 3224 true Chr12: 6213402-6216625 Glycine max
Glyma.12G079500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6213402-6214401 Glycine max
Glyma.12G079500 2.0kb upstream 2.0kb upstream 4224 true Chr12: 6214402-6218625 Glycine max
Glyma.12G079500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6216626-6218625 Glycine max
Glyma.12G079500 2.0kb downstream 2.0kb downstream 4224 true Chr12: 6212402-6216625 Glycine max
Glyma.12G079500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6212402-6214401 Glycine max
Glyma.12G079500 5.0kb upstream 5.0kb upstream 7224 true Chr12: 6214402-6221625 Glycine max
Glyma.12G079500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6216626-6221625 Glycine max
Glyma.12G079500 5.0kb downstream 5.0kb downstream 7224 true Chr12: 6209402-6216625 Glycine max
Glyma.12G079500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6209402-6214401 Glycine max
Glyma.12G079500 10.0kb upstream 10.0kb upstream 12224 true Chr12: 6214402-6226625 Glycine max
Glyma.12G079500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6216626-6226625 Glycine max
Glyma.12G079500 10.0kb downstream 10.0kb downstream 12224 true Chr12: 6204402-6216625 Glycine max
Glyma.12G079500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6204402-6214401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315239 5265 Fabidae View MSA
124064314 5270 Rosid View MSA
123746961 5271 Pentapetalae View MSA
122796317 5272 Eudicot View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4801 0.0 30.838    
cufflinks 31.5216 0.0 85.754 High High
cufflinks 16.8681 0.0 45.0018   High
cufflinks 7.19484 0.0 19.8714    
cufflinks 6.05802 0.0 17.0038    
cufflinks 6.58319 0.0 18.3497    
cufflinks 7.05785 0.0 19.5003    
cufflinks 8.90674 0.0 24.2417    
cufflinks 7.498 0.0 20.6901    
cufflinks 115.366     High High
cufflinks 11.986     High  
cufflinks 35.624     High  
cufflinks 10.088     High  
cufflinks 6.255       Low
cufflinks 14.559     High  
cufflinks 24.456     High  
cufflinks 30.628     High  
cufflinks 38.097     High  
cufflinks 35.891     High  
cufflinks 23.294     High  
cufflinks 3.303       Low
cufflinks 16.485     High  
cufflinks 27.213     High  
cufflinks 2.956       Low
cufflinks 21.92     High  
cufflinks 15.741     High  

0 Strain