Gene : Glyma.12G080800 G. max Wm82.a2.v1
Defline:  (1 of 13) PF07795 - Protein of unknown function (DUF1635) (DUF1635) Genomic Order:  808
Name:  ? Glyma.12G080800 Secondary Identifier:  ? PAC:30546607
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G080800 0.5kb upstream 0.5kb upstream 2190 true Chr12: 6376227-6378416 Glycine max
Glyma.12G080800 0.5kb upstream 0.5kb upstream 500 false Chr12: 6376227-6376726 Glycine max
Glyma.12G080800 0.5kb downstream 0.5kb downstream 2190 true Chr12: 6376727-6378916 Glycine max
Glyma.12G080800 0.5kb downstream 0.5kb downstream 500 false Chr12: 6378417-6378916 Glycine max
Glyma.12G080800 1.0kb upstream 1.0kb upstream 2690 true Chr12: 6375727-6378416 Glycine max
Glyma.12G080800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6375727-6376726 Glycine max
Glyma.12G080800 1.0kb downstream 1.0kb downstream 2690 true Chr12: 6376727-6379416 Glycine max
Glyma.12G080800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6378417-6379416 Glycine max
Glyma.12G080800 2.0kb upstream 2.0kb upstream 3690 true Chr12: 6374727-6378416 Glycine max
Glyma.12G080800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6374727-6376726 Glycine max
Glyma.12G080800 2.0kb downstream 2.0kb downstream 3690 true Chr12: 6376727-6380416 Glycine max
Glyma.12G080800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6378417-6380416 Glycine max
Glyma.12G080800 5.0kb upstream 5.0kb upstream 6690 true Chr12: 6371727-6378416 Glycine max
Glyma.12G080800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6371727-6376726 Glycine max
Glyma.12G080800 5.0kb downstream 5.0kb downstream 6690 true Chr12: 6376727-6383416 Glycine max
Glyma.12G080800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6378417-6383416 Glycine max
Glyma.12G080800 10.0kb upstream 10.0kb upstream 11690 true Chr12: 6366727-6378416 Glycine max
Glyma.12G080800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6366727-6376726 Glycine max
Glyma.12G080800 10.0kb downstream 10.0kb downstream 11690 true Chr12: 6376727-6388416 Glycine max
Glyma.12G080800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6378417-6388416 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307982 5265 Fabidae View MSA
124069080 5270 Rosid View MSA
123751096 5271 Pentapetalae View MSA
122788553 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.04303 0.0 9.68515   Low
cufflinks 8.88634 0.0 24.6492    
cufflinks 43.8888 0.0 120.435 High  
cufflinks 70.7663 0.0 204.471 High High
cufflinks 13.7738 0.0 37.126    
cufflinks 2.62524 0.0 8.52307   Low
cufflinks 6.22727 0.0 17.9657    
cufflinks 121.313 0.0 382.635 High High
cufflinks 10.9047 0.0 29.7537    
cufflinks 46.773     High High
cufflinks 0.855        
cufflinks 27.352     High High
cufflinks 4.704        
cufflinks 1.505        
cufflinks 4.175        
cufflinks 0.835        
cufflinks 1.476        
cufflinks 14.98     High High
cufflinks 6.901        
cufflinks 0.481       Low
cufflinks 0.889        
cufflinks 0.712        
cufflinks 1.877        
cufflinks 1.461        
cufflinks 0.743        
cufflinks 0.98        

0 Strain