Gene : Glyma.12G083200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13258:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 132 Genomic Order:  832
Name:  ? Glyma.12G083200 Secondary Identifier:  ? PAC:30546452
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G083200 0.5kb upstream 0.5kb upstream 17062 true Chr12: 6594911-6611972 Glycine max
Glyma.12G083200 0.5kb upstream 0.5kb upstream 500 false Chr12: 6611473-6611972 Glycine max
Glyma.12G083200 0.5kb downstream 0.5kb downstream 17062 true Chr12: 6594411-6611472 Glycine max
Glyma.12G083200 0.5kb downstream 0.5kb downstream 500 false Chr12: 6594411-6594910 Glycine max
Glyma.12G083200 1.0kb upstream 1.0kb upstream 17562 true Chr12: 6594911-6612472 Glycine max
Glyma.12G083200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6611473-6612472 Glycine max
Glyma.12G083200 1.0kb downstream 1.0kb downstream 17562 true Chr12: 6593911-6611472 Glycine max
Glyma.12G083200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6593911-6594910 Glycine max
Glyma.12G083200 2.0kb upstream 2.0kb upstream 18562 true Chr12: 6594911-6613472 Glycine max
Glyma.12G083200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6611473-6613472 Glycine max
Glyma.12G083200 2.0kb downstream 2.0kb downstream 18562 true Chr12: 6592911-6611472 Glycine max
Glyma.12G083200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6592911-6594910 Glycine max
Glyma.12G083200 5.0kb upstream 5.0kb upstream 21562 true Chr12: 6594911-6616472 Glycine max
Glyma.12G083200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6611473-6616472 Glycine max
Glyma.12G083200 5.0kb downstream 5.0kb downstream 21562 true Chr12: 6589911-6611472 Glycine max
Glyma.12G083200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6589911-6594910 Glycine max
Glyma.12G083200 10.0kb upstream 10.0kb upstream 26562 true Chr12: 6594911-6621472 Glycine max
Glyma.12G083200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6611473-6621472 Glycine max
Glyma.12G083200 10.0kb downstream 10.0kb downstream 26562 true Chr12: 6584911-6611472 Glycine max
Glyma.12G083200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6584911-6594910 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304203 5265 Fabidae View MSA
124064722 5270 Rosid View MSA
123746708 5271 Pentapetalae View MSA
122787335 5272 Eudicot View MSA
122045793 5273 Angiosperm View MSA
121345284 5274 Embryophyte View MSA
123426551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.217 0.0 30.184   High
cufflinks 9.81742 0.0 26.2974    
cufflinks 8.59045 0.0 22.9541    
cufflinks 10.3173 0.0 27.6862    
cufflinks 10.0421 0.0 26.905    
cufflinks 6.9843 0.0 18.6367   Low
cufflinks 9.89165 0.0 26.4814    
cufflinks 10.106 0.0 27.0977    
cufflinks 7.5608 0.0 20.1715   Low
cufflinks 3.584        
cufflinks 1.351       Low
cufflinks 2.351        
cufflinks 3.622        
cufflinks 4.066        
cufflinks 1.859       Low
cufflinks 3.772        
cufflinks 1.566       Low
cufflinks 3.299        
cufflinks 3.912        
cufflinks 3.992        
cufflinks 2.128        
cufflinks 4.283       High
cufflinks 3.026        
cufflinks 1.808       Low
cufflinks 3.701        
cufflinks 2.561        

0 Strain