Gene : Glyma.12G141400 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4020 - Protein DRE2, required for cell viability Genomic Order:  1414
Name:  ? Glyma.12G141400 Secondary Identifier:  ? PAC:30545701
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G141400 0.5kb upstream 0.5kb upstream 3887 true Chr12: 17718651-17722537 Glycine max
Glyma.12G141400 0.5kb upstream 0.5kb upstream 500 false Chr12: 17722038-17722537 Glycine max
Glyma.12G141400 0.5kb downstream 0.5kb downstream 3887 true Chr12: 17718151-17722037 Glycine max
Glyma.12G141400 0.5kb downstream 0.5kb downstream 500 false Chr12: 17718151-17718650 Glycine max
Glyma.12G141400 1.0kb upstream 1.0kb upstream 4387 true Chr12: 17718651-17723037 Glycine max
Glyma.12G141400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 17722038-17723037 Glycine max
Glyma.12G141400 1.0kb downstream 1.0kb downstream 4387 true Chr12: 17717651-17722037 Glycine max
Glyma.12G141400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 17717651-17718650 Glycine max
Glyma.12G141400 2.0kb upstream 2.0kb upstream 5387 true Chr12: 17718651-17724037 Glycine max
Glyma.12G141400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 17722038-17724037 Glycine max
Glyma.12G141400 2.0kb downstream 2.0kb downstream 5387 true Chr12: 17716651-17722037 Glycine max
Glyma.12G141400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 17716651-17718650 Glycine max
Glyma.12G141400 5.0kb upstream 5.0kb upstream 8387 true Chr12: 17718651-17727037 Glycine max
Glyma.12G141400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 17722038-17727037 Glycine max
Glyma.12G141400 5.0kb downstream 5.0kb downstream 8387 true Chr12: 17713651-17722037 Glycine max
Glyma.12G141400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 17713651-17718650 Glycine max
Glyma.12G141400 10.0kb upstream 10.0kb upstream 13387 true Chr12: 17718651-17732037 Glycine max
Glyma.12G141400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 17722038-17732037 Glycine max
Glyma.12G141400 10.0kb downstream 10.0kb downstream 13387 true Chr12: 17708651-17722037 Glycine max
Glyma.12G141400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 17708651-17718650 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308824 5265 Fabidae View MSA
124060414 5270 Rosid View MSA
123741055 5271 Pentapetalae View MSA
122788578 5272 Eudicot View MSA
122047099 5273 Angiosperm View MSA
121344266 5274 Embryophyte View MSA
123424470 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5004 0.0 39.3844   Low
cufflinks 13.8392 0.0 37.642   Low
cufflinks 17.0788 0.0 45.8724    
cufflinks 17.9131 0.0 48.1023    
cufflinks 17.8274 0.0 47.9417    
cufflinks 23.5216 0.0 62.7794 High High
cufflinks 16.9906 0.0 45.7773    
cufflinks 21.8443 0.0 58.3524 High High
cufflinks 18.8082 0.0 50.4331    
cufflinks 5.287        
cufflinks 4.725        
cufflinks 6.521        
cufflinks 7.934     High High
cufflinks 8.397     High High
cufflinks 3.468        
cufflinks 2.898       Low
cufflinks 5.797        
cufflinks 6.324        
cufflinks 4.915        
cufflinks 2.26       Low
cufflinks 5.139        
cufflinks 2.93       Low
cufflinks 3.909        
cufflinks 5.715        
cufflinks 2.823       Low
cufflinks 4.313        

0 Strain