Gene : Glyma.12G129900 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1299
Name:  ? Glyma.12G129900 Secondary Identifier:  ? PAC:30545533
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G129900 0.5kb upstream 0.5kb upstream 1911 true Chr12: 14527288-14529198 Glycine max
Glyma.12G129900 0.5kb upstream 0.5kb upstream 500 false Chr12: 14527288-14527787 Glycine max
Glyma.12G129900 0.5kb downstream 0.5kb downstream 1911 true Chr12: 14527788-14529698 Glycine max
Glyma.12G129900 0.5kb downstream 0.5kb downstream 500 false Chr12: 14529199-14529698 Glycine max
Glyma.12G129900 1.0kb upstream 1.0kb upstream 2411 true Chr12: 14526788-14529198 Glycine max
Glyma.12G129900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 14526788-14527787 Glycine max
Glyma.12G129900 1.0kb downstream 1.0kb downstream 2411 true Chr12: 14527788-14530198 Glycine max
Glyma.12G129900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 14529199-14530198 Glycine max
Glyma.12G129900 2.0kb upstream 2.0kb upstream 3411 true Chr12: 14525788-14529198 Glycine max
Glyma.12G129900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 14525788-14527787 Glycine max
Glyma.12G129900 2.0kb downstream 2.0kb downstream 3411 true Chr12: 14527788-14531198 Glycine max
Glyma.12G129900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 14529199-14531198 Glycine max
Glyma.12G129900 5.0kb upstream 5.0kb upstream 6411 true Chr12: 14522788-14529198 Glycine max
Glyma.12G129900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 14522788-14527787 Glycine max
Glyma.12G129900 5.0kb downstream 5.0kb downstream 6411 true Chr12: 14527788-14534198 Glycine max
Glyma.12G129900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 14529199-14534198 Glycine max
Glyma.12G129900 10.0kb upstream 10.0kb upstream 11411 true Chr12: 14517788-14529198 Glycine max
Glyma.12G129900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 14517788-14527787 Glycine max
Glyma.12G129900 10.0kb downstream 10.0kb downstream 11411 true Chr12: 14527788-14539198 Glycine max
Glyma.12G129900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 14529199-14539198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310767 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23902 0.0 7.5331    
cufflinks 0.0155797 0.0 0.0706541 Low Low
cufflinks 9.96127 0.0 27.4778   High
cufflinks 0.291925 0.0 1.11863    
cufflinks 2.2861 0.0 7.68769    
cufflinks 0.730483 0.0 2.68611    
cufflinks 0.116946 0.0 0.465493 Low  
cufflinks 0.174204 0.0 0.682435 Low  
cufflinks 2.7687 0.0 9.04509    
cufflinks 0.086     Low  
cufflinks 19.461     High High
cufflinks 5.699        
cufflinks 0.371        
cufflinks 0.073        
cufflinks 33.754     High High
cufflinks 0.14        
cufflinks 2.02        
cufflinks 0.152        
cufflinks 0.095     Low  
cufflinks 0.408        
cufflinks 10.838     High High
cufflinks 0.065     Low  
cufflinks 0.013     Low Low
cufflinks 15.107     High High
cufflinks 0.222        
cufflinks 8.664     High High

0 Strain