Gene : Glyma.12G135000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10617:SF115 - THIAMINE THIAZOLE SYNTHASE Genomic Order:  1350
Name:  ? Glyma.12G135000 Secondary Identifier:  ? PAC:30546738
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G135000 0.5kb upstream 0.5kb upstream 4038 true Chr12: 15678336-15682373 Glycine max
Glyma.12G135000 0.5kb upstream 0.5kb upstream 500 false Chr12: 15681874-15682373 Glycine max
Glyma.12G135000 0.5kb downstream 0.5kb downstream 4038 true Chr12: 15677836-15681873 Glycine max
Glyma.12G135000 0.5kb downstream 0.5kb downstream 500 false Chr12: 15677836-15678335 Glycine max
Glyma.12G135000 1.0kb upstream 1.0kb upstream 4538 true Chr12: 15678336-15682873 Glycine max
Glyma.12G135000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 15681874-15682873 Glycine max
Glyma.12G135000 1.0kb downstream 1.0kb downstream 4538 true Chr12: 15677336-15681873 Glycine max
Glyma.12G135000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 15677336-15678335 Glycine max
Glyma.12G135000 2.0kb upstream 2.0kb upstream 5538 true Chr12: 15678336-15683873 Glycine max
Glyma.12G135000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 15681874-15683873 Glycine max
Glyma.12G135000 2.0kb downstream 2.0kb downstream 5538 true Chr12: 15676336-15681873 Glycine max
Glyma.12G135000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 15676336-15678335 Glycine max
Glyma.12G135000 5.0kb upstream 5.0kb upstream 8538 true Chr12: 15678336-15686873 Glycine max
Glyma.12G135000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 15681874-15686873 Glycine max
Glyma.12G135000 5.0kb downstream 5.0kb downstream 8538 true Chr12: 15673336-15681873 Glycine max
Glyma.12G135000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 15673336-15678335 Glycine max
Glyma.12G135000 10.0kb upstream 10.0kb upstream 13538 true Chr12: 15678336-15691873 Glycine max
Glyma.12G135000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 15681874-15691873 Glycine max
Glyma.12G135000 10.0kb downstream 10.0kb downstream 13538 true Chr12: 15668336-15681873 Glycine max
Glyma.12G135000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 15668336-15678335 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309348 5265 Fabidae View MSA
124071218 5270 Rosid View MSA
123744490 5271 Pentapetalae View MSA
122793615 5272 Eudicot View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.4011 0.0 78.8009 High  
cufflinks 1.73884 0.0 5.97318   Low
cufflinks 2.54416 0.0 8.37676   Low
cufflinks 24.9735 0.0 66.6641 High  
cufflinks 86.9386 0.0 258.392 High  
cufflinks 2.18663 0.0 7.28537   Low
cufflinks 17.5411 0.0 46.8933    
cufflinks 29.7052 0.0 79.6203 High  
cufflinks 350.217 0.0 1423.07 High High
cufflinks 0.03     Low Low
cufflinks 0.168        
cufflinks 0.606        
cufflinks 1.087        
cufflinks 0.567        
cufflinks 11.831     High High
cufflinks 0.552        
cufflinks 2.25       High
cufflinks 1.653        
cufflinks 0.097     Low Low
cufflinks 0.496        
cufflinks 0.168        
cufflinks 0.444        
cufflinks 0.269        
cufflinks 0.386        
cufflinks 0.565        
cufflinks 0.42        

0 Strain