Gene : Glyma.12G117600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10943 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  1176
Name:  ? Glyma.12G117600 Secondary Identifier:  ? PAC:30547637
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G117600 0.5kb upstream 0.5kb upstream 7866 true Chr12: 11913389-11921254 Glycine max
Glyma.12G117600 0.5kb upstream 0.5kb upstream 500 false Chr12: 11920755-11921254 Glycine max
Glyma.12G117600 0.5kb downstream 0.5kb downstream 7866 true Chr12: 11912889-11920754 Glycine max
Glyma.12G117600 0.5kb downstream 0.5kb downstream 500 false Chr12: 11912889-11913388 Glycine max
Glyma.12G117600 1.0kb upstream 1.0kb upstream 8366 true Chr12: 11913389-11921754 Glycine max
Glyma.12G117600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11920755-11921754 Glycine max
Glyma.12G117600 1.0kb downstream 1.0kb downstream 8366 true Chr12: 11912389-11920754 Glycine max
Glyma.12G117600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11912389-11913388 Glycine max
Glyma.12G117600 2.0kb upstream 2.0kb upstream 9366 true Chr12: 11913389-11922754 Glycine max
Glyma.12G117600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11920755-11922754 Glycine max
Glyma.12G117600 2.0kb downstream 2.0kb downstream 9366 true Chr12: 11911389-11920754 Glycine max
Glyma.12G117600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11911389-11913388 Glycine max
Glyma.12G117600 5.0kb upstream 5.0kb upstream 12366 true Chr12: 11913389-11925754 Glycine max
Glyma.12G117600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11920755-11925754 Glycine max
Glyma.12G117600 5.0kb downstream 5.0kb downstream 12366 true Chr12: 11908389-11920754 Glycine max
Glyma.12G117600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11908389-11913388 Glycine max
Glyma.12G117600 10.0kb upstream 10.0kb upstream 17366 true Chr12: 11913389-11930754 Glycine max
Glyma.12G117600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11920755-11930754 Glycine max
Glyma.12G117600 10.0kb downstream 10.0kb downstream 17366 true Chr12: 11903389-11920754 Glycine max
Glyma.12G117600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11903389-11913388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310505 5265 Fabidae View MSA
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.5579 0.0 106.694 High Low
cufflinks 39.5152 0.0 116.646 High  
cufflinks 52.382 0.0 162.193 High High
cufflinks 41.439 0.0 123.253 High  
cufflinks 51.9565 0.0 160.216 High High
cufflinks 45.5457 0.0 137.451 High  
cufflinks 47.2499 0.0 143.161 High  
cufflinks 43.893 0.0 131.75 High  
cufflinks 40.4341 0.0 119.87 High  
cufflinks 19.348     High  
cufflinks 11.903     High Low
cufflinks 18.652     High  
cufflinks 28.841     High High
cufflinks 31.492     High High
cufflinks 10.47     High Low
cufflinks 16.246     High  
cufflinks 11.497     High Low
cufflinks 17.711     High  
cufflinks 21.196     High  
cufflinks 14.087     High  
cufflinks 13.745     High  
cufflinks 15.195     High  
cufflinks 15.258     High  
cufflinks 14.428     High  
cufflinks 14.569     High  
cufflinks 15.707     High  

0 Strain