Gene : Glyma.12G119800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23405:SF4 - PROTEIN MAK16 HOMOLOG Genomic Order:  1198
Name:  ? Glyma.12G119800 Secondary Identifier:  ? PAC:30548743
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G119800 0.5kb upstream 0.5kb upstream 8404 true Chr12: 12745378-12753781 Glycine max
Glyma.12G119800 0.5kb upstream 0.5kb upstream 500 false Chr12: 12753282-12753781 Glycine max
Glyma.12G119800 0.5kb downstream 0.5kb downstream 8404 true Chr12: 12744878-12753281 Glycine max
Glyma.12G119800 0.5kb downstream 0.5kb downstream 500 false Chr12: 12744878-12745377 Glycine max
Glyma.12G119800 1.0kb upstream 1.0kb upstream 8904 true Chr12: 12745378-12754281 Glycine max
Glyma.12G119800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12753282-12754281 Glycine max
Glyma.12G119800 1.0kb downstream 1.0kb downstream 8904 true Chr12: 12744378-12753281 Glycine max
Glyma.12G119800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12744378-12745377 Glycine max
Glyma.12G119800 2.0kb upstream 2.0kb upstream 9904 true Chr12: 12745378-12755281 Glycine max
Glyma.12G119800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12753282-12755281 Glycine max
Glyma.12G119800 2.0kb downstream 2.0kb downstream 9904 true Chr12: 12743378-12753281 Glycine max
Glyma.12G119800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12743378-12745377 Glycine max
Glyma.12G119800 5.0kb upstream 5.0kb upstream 12904 true Chr12: 12745378-12758281 Glycine max
Glyma.12G119800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12753282-12758281 Glycine max
Glyma.12G119800 5.0kb downstream 5.0kb downstream 12904 true Chr12: 12740378-12753281 Glycine max
Glyma.12G119800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12740378-12745377 Glycine max
Glyma.12G119800 10.0kb upstream 10.0kb upstream 17904 true Chr12: 12745378-12763281 Glycine max
Glyma.12G119800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12753282-12763281 Glycine max
Glyma.12G119800 10.0kb downstream 10.0kb downstream 17904 true Chr12: 12735378-12753281 Glycine max
Glyma.12G119800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12735378-12745377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306051 5265 Fabidae View MSA
124061787 5270 Rosid View MSA
123739269 5271 Pentapetalae View MSA
122788888 5272 Eudicot View MSA
122042621 5273 Angiosperm View MSA
121345777 5274 Embryophyte View MSA
123426368 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1107 0.0 31.6463    
cufflinks 10.6745 0.0 53.711    
cufflinks 6.71921 0.0 34.2146   Low
cufflinks 8.3579 0.0 41.8482    
cufflinks 12.1476 0.0 50.1885    
cufflinks 9.04091 0.0 34.4496    
cufflinks 14.1526 0.0 60.9229   High
cufflinks 8.48894 0.0 41.006    
cufflinks 10.9187 0.0 50.6375    
cufflinks 0.712        
cufflinks 0.469       Low
cufflinks 0.965        
cufflinks 1.497       High
cufflinks 1.821       High
cufflinks 0.604        
cufflinks 0.749        
cufflinks 0.661        
cufflinks 1.055        
cufflinks 0.958        
cufflinks 0.659        
cufflinks 0.701        
cufflinks 0.669        
cufflinks 0.978        
cufflinks 0.518       Low
cufflinks 0.693        
cufflinks 0.825        

0 Strain