Gene : Glyma.12G120300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10909:SF11 - ACYL-COENZYME A OXIDASE-LIKE PROTEIN Genomic Order:  1203
Name:  ? Glyma.12G120300 Secondary Identifier:  ? PAC:30548720
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-6837 Glycine max pathologic  
Gmax PWY-735 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G120300 0.5kb upstream 0.5kb upstream 6440 true Chr12: 12813387-12819826 Glycine max
Glyma.12G120300 0.5kb upstream 0.5kb upstream 500 false Chr12: 12819327-12819826 Glycine max
Glyma.12G120300 0.5kb downstream 0.5kb downstream 6440 true Chr12: 12812887-12819326 Glycine max
Glyma.12G120300 0.5kb downstream 0.5kb downstream 500 false Chr12: 12812887-12813386 Glycine max
Glyma.12G120300 1.0kb upstream 1.0kb upstream 6940 true Chr12: 12813387-12820326 Glycine max
Glyma.12G120300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12819327-12820326 Glycine max
Glyma.12G120300 1.0kb downstream 1.0kb downstream 6940 true Chr12: 12812387-12819326 Glycine max
Glyma.12G120300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12812387-12813386 Glycine max
Glyma.12G120300 2.0kb upstream 2.0kb upstream 7940 true Chr12: 12813387-12821326 Glycine max
Glyma.12G120300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12819327-12821326 Glycine max
Glyma.12G120300 2.0kb downstream 2.0kb downstream 7940 true Chr12: 12811387-12819326 Glycine max
Glyma.12G120300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12811387-12813386 Glycine max
Glyma.12G120300 5.0kb upstream 5.0kb upstream 10940 true Chr12: 12813387-12824326 Glycine max
Glyma.12G120300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12819327-12824326 Glycine max
Glyma.12G120300 5.0kb downstream 5.0kb downstream 10940 true Chr12: 12808387-12819326 Glycine max
Glyma.12G120300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12808387-12813386 Glycine max
Glyma.12G120300 10.0kb upstream 10.0kb upstream 15940 true Chr12: 12813387-12829326 Glycine max
Glyma.12G120300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12819327-12829326 Glycine max
Glyma.12G120300 10.0kb downstream 10.0kb downstream 15940 true Chr12: 12803387-12819326 Glycine max
Glyma.12G120300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12803387-12813386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301434 5265 Fabidae View MSA
124066099 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.24037 0.0 24.7867    
cufflinks 4.80873 0.0 13.4688   Low
cufflinks 22.1308 0.0 59.9769 High High
cufflinks 10.2466 0.0 27.4088    
cufflinks 11.4668 0.0 30.6105    
cufflinks 13.0695 0.0 34.869    
cufflinks 6.15409 0.0 16.8705    
cufflinks 5.42645 0.0 15.0225   Low
cufflinks 10.7985 0.0 28.8513    
cufflinks 2.158       Low
cufflinks 12.79     High High
cufflinks 8.091     High High
cufflinks 3.775        
cufflinks 3.727        
cufflinks 7.696     High High
cufflinks 2.513        
cufflinks 3.783        
cufflinks 7.43     High High
cufflinks 2.79        
cufflinks 2.555        
cufflinks 6.619     High  
cufflinks 2.703        
cufflinks 2.487        
cufflinks 7.912     High High
cufflinks 2.59        
cufflinks 4.961        

0 Strain