Gene : Glyma.12G120400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24073:SF551 - RAS-RELATED PROTEIN RABA1I Genomic Order:  1204
Name:  ? Glyma.12G120400 Secondary Identifier:  ? PAC:30547739
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G120400 0.5kb upstream 0.5kb upstream 3820 true Chr12: 12830269-12834088 Glycine max
Glyma.12G120400 0.5kb upstream 0.5kb upstream 500 false Chr12: 12833589-12834088 Glycine max
Glyma.12G120400 0.5kb downstream 0.5kb downstream 3820 true Chr12: 12829769-12833588 Glycine max
Glyma.12G120400 0.5kb downstream 0.5kb downstream 500 false Chr12: 12829769-12830268 Glycine max
Glyma.12G120400 1.0kb upstream 1.0kb upstream 4320 true Chr12: 12830269-12834588 Glycine max
Glyma.12G120400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12833589-12834588 Glycine max
Glyma.12G120400 1.0kb downstream 1.0kb downstream 4320 true Chr12: 12829269-12833588 Glycine max
Glyma.12G120400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12829269-12830268 Glycine max
Glyma.12G120400 2.0kb upstream 2.0kb upstream 5320 true Chr12: 12830269-12835588 Glycine max
Glyma.12G120400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12833589-12835588 Glycine max
Glyma.12G120400 2.0kb downstream 2.0kb downstream 5320 true Chr12: 12828269-12833588 Glycine max
Glyma.12G120400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12828269-12830268 Glycine max
Glyma.12G120400 5.0kb upstream 5.0kb upstream 8320 true Chr12: 12830269-12838588 Glycine max
Glyma.12G120400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12833589-12838588 Glycine max
Glyma.12G120400 5.0kb downstream 5.0kb downstream 8320 true Chr12: 12825269-12833588 Glycine max
Glyma.12G120400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12825269-12830268 Glycine max
Glyma.12G120400 10.0kb upstream 10.0kb upstream 13320 true Chr12: 12830269-12843588 Glycine max
Glyma.12G120400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12833589-12843588 Glycine max
Glyma.12G120400 10.0kb downstream 10.0kb downstream 13320 true Chr12: 12820269-12833588 Glycine max
Glyma.12G120400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12820269-12830268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314290 5265 Fabidae View MSA
124074374 5270 Rosid View MSA
123750734 5271 Pentapetalae View MSA
122796076 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3011 0.0 33.7923    
cufflinks 4.57728 0.0 14.1501   Low
cufflinks 9.95288 0.0 27.8785    
cufflinks 10.6694 0.0 29.6562    
cufflinks 8.55585 0.0 24.2806    
cufflinks 12.3595 0.0 33.9165    
cufflinks 15.7377 0.0 42.5537   High
cufflinks 14.6604 0.0 39.7738    
cufflinks 7.58253 0.0 21.8351    
cufflinks 2.319        
cufflinks 2.761        
cufflinks 2.344        
cufflinks 2.588        
cufflinks 2.803        
cufflinks 3.577       High
cufflinks 1.256       Low
cufflinks 2.212        
cufflinks 3.814       High
cufflinks 1.167       Low
cufflinks 1.477       Low
cufflinks 2.66        
cufflinks 1.869        
cufflinks 1.316       Low
cufflinks 4.537       High
cufflinks 1.505        
cufflinks 2.922        

0 Strain