Gene : Glyma.12G120500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23115:SF14 - ELONGATION FACTOR FAMILY PROTEIN Genomic Order:  1205
Name:  ? Glyma.12G120500 Secondary Identifier:  ? PAC:30548243
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G120500 0.5kb upstream 0.5kb upstream 10544 true Chr12: 12847421-12857964 Glycine max
Glyma.12G120500 0.5kb upstream 0.5kb upstream 500 false Chr12: 12857465-12857964 Glycine max
Glyma.12G120500 0.5kb downstream 0.5kb downstream 10544 true Chr12: 12846921-12857464 Glycine max
Glyma.12G120500 0.5kb downstream 0.5kb downstream 500 false Chr12: 12846921-12847420 Glycine max
Glyma.12G120500 1.0kb upstream 1.0kb upstream 11044 true Chr12: 12847421-12858464 Glycine max
Glyma.12G120500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12857465-12858464 Glycine max
Glyma.12G120500 1.0kb downstream 1.0kb downstream 11044 true Chr12: 12846421-12857464 Glycine max
Glyma.12G120500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12846421-12847420 Glycine max
Glyma.12G120500 2.0kb upstream 2.0kb upstream 12044 true Chr12: 12847421-12859464 Glycine max
Glyma.12G120500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12857465-12859464 Glycine max
Glyma.12G120500 2.0kb downstream 2.0kb downstream 12044 true Chr12: 12845421-12857464 Glycine max
Glyma.12G120500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12845421-12847420 Glycine max
Glyma.12G120500 5.0kb upstream 5.0kb upstream 15044 true Chr12: 12847421-12862464 Glycine max
Glyma.12G120500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12857465-12862464 Glycine max
Glyma.12G120500 5.0kb downstream 5.0kb downstream 15044 true Chr12: 12842421-12857464 Glycine max
Glyma.12G120500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12842421-12847420 Glycine max
Glyma.12G120500 10.0kb upstream 10.0kb upstream 20044 true Chr12: 12847421-12867464 Glycine max
Glyma.12G120500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12857465-12867464 Glycine max
Glyma.12G120500 10.0kb downstream 10.0kb downstream 20044 true Chr12: 12837421-12857464 Glycine max
Glyma.12G120500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12837421-12847420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300054 5265 Fabidae View MSA
124067913 5270 Rosid View MSA
123740799 5271 Pentapetalae View MSA
122792956 5272 Eudicot View MSA
122047839 5273 Angiosperm View MSA
121347547 5274 Embryophyte View MSA
123425076 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06682 0.0 24.3251   High
cufflinks 1.56914 0.0 10.4768    
cufflinks 1.04045 0.0 5.98718   Low
cufflinks 2.24349 0.0 13.653    
cufflinks 4.21041 0.0 19.6087    
cufflinks 1.23432 0.0 6.62754   Low
cufflinks 4.46057 0.0 18.8965   High
cufflinks 1.86372 0.0 8.88224    
cufflinks 2.34095 0.0 10.5304    
cufflinks 0.112        
cufflinks 0.053     Low Low
cufflinks 0.146        
cufflinks 0.377       High
cufflinks 0.545       High
cufflinks 0.077        
cufflinks 0.081     Low  
cufflinks 0.107        
cufflinks 0.156        
cufflinks 0.179        
cufflinks 0.052     Low Low
cufflinks 0.072        
cufflinks 0.07     Low  
cufflinks 0.106        
cufflinks 0.061        
cufflinks 0.066     Low  
cufflinks 0.119        

0 Strain