Gene : Glyma.12G121000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1210
Name:  ? Glyma.12G121000 Secondary Identifier:  ? PAC:30545914
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G121000 0.5kb upstream 0.5kb upstream 4161 true Chr12: 12895793-12899953 Glycine max
Glyma.12G121000 0.5kb upstream 0.5kb upstream 500 false Chr12: 12895793-12896292 Glycine max
Glyma.12G121000 0.5kb downstream 0.5kb downstream 4161 true Chr12: 12896293-12900453 Glycine max
Glyma.12G121000 0.5kb downstream 0.5kb downstream 500 false Chr12: 12899954-12900453 Glycine max
Glyma.12G121000 1.0kb upstream 1.0kb upstream 4661 true Chr12: 12895293-12899953 Glycine max
Glyma.12G121000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12895293-12896292 Glycine max
Glyma.12G121000 1.0kb downstream 1.0kb downstream 4661 true Chr12: 12896293-12900953 Glycine max
Glyma.12G121000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12899954-12900953 Glycine max
Glyma.12G121000 2.0kb upstream 2.0kb upstream 5661 true Chr12: 12894293-12899953 Glycine max
Glyma.12G121000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12894293-12896292 Glycine max
Glyma.12G121000 2.0kb downstream 2.0kb downstream 5661 true Chr12: 12896293-12901953 Glycine max
Glyma.12G121000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12899954-12901953 Glycine max
Glyma.12G121000 5.0kb upstream 5.0kb upstream 8661 true Chr12: 12891293-12899953 Glycine max
Glyma.12G121000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12891293-12896292 Glycine max
Glyma.12G121000 5.0kb downstream 5.0kb downstream 8661 true Chr12: 12896293-12904953 Glycine max
Glyma.12G121000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12899954-12904953 Glycine max
Glyma.12G121000 10.0kb upstream 10.0kb upstream 13661 true Chr12: 12886293-12899953 Glycine max
Glyma.12G121000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12886293-12896292 Glycine max
Glyma.12G121000 10.0kb downstream 10.0kb downstream 13661 true Chr12: 12896293-12909953 Glycine max
Glyma.12G121000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12899954-12909953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.587327 0.0 2.11783    
cufflinks 4.47394 0.0 12.7101    
cufflinks 0.431846 0.0 1.5838    
cufflinks 0.323495 0.0 1.20397    
cufflinks 9.7894 0.0 26.2792   High
cufflinks 4.35249 0.0 12.4168    
cufflinks 0.0330596 0.0 0.135612 Low Low
cufflinks 1.21061 0.0 4.09156    
cufflinks 3.71947 0.0 10.8081    
cufflinks 6.003        
cufflinks 0.488        
cufflinks 1.666        
cufflinks 6.814        
cufflinks 10.982     High  
cufflinks 0.021     Low Low
cufflinks 11.998     High  
cufflinks 0.852        
cufflinks 6.254        
cufflinks 2.18        
cufflinks 10.718     High  
cufflinks 0.576        
cufflinks 10.168     High  
cufflinks 8.84     High  
cufflinks 0.183       Low
cufflinks 9.225     High  
cufflinks 1.713        

0 Strain