Gene : Glyma.12G122800 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1319 - bHLHZip transcription factor BIGMAX Genomic Order:  1228
Name:  ? Glyma.12G122800 Secondary Identifier:  ? PAC:30549078
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G122800 0.5kb upstream 0.5kb upstream 2625 true Chr12: 13416395-13419019 Glycine max
Glyma.12G122800 0.5kb upstream 0.5kb upstream 500 false Chr12: 13418520-13419019 Glycine max
Glyma.12G122800 0.5kb downstream 0.5kb downstream 2625 true Chr12: 13415895-13418519 Glycine max
Glyma.12G122800 0.5kb downstream 0.5kb downstream 500 false Chr12: 13415895-13416394 Glycine max
Glyma.12G122800 1.0kb upstream 1.0kb upstream 3125 true Chr12: 13416395-13419519 Glycine max
Glyma.12G122800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 13418520-13419519 Glycine max
Glyma.12G122800 1.0kb downstream 1.0kb downstream 3125 true Chr12: 13415395-13418519 Glycine max
Glyma.12G122800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 13415395-13416394 Glycine max
Glyma.12G122800 2.0kb upstream 2.0kb upstream 4125 true Chr12: 13416395-13420519 Glycine max
Glyma.12G122800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 13418520-13420519 Glycine max
Glyma.12G122800 2.0kb downstream 2.0kb downstream 4125 true Chr12: 13414395-13418519 Glycine max
Glyma.12G122800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 13414395-13416394 Glycine max
Glyma.12G122800 5.0kb upstream 5.0kb upstream 7125 true Chr12: 13416395-13423519 Glycine max
Glyma.12G122800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 13418520-13423519 Glycine max
Glyma.12G122800 5.0kb downstream 5.0kb downstream 7125 true Chr12: 13411395-13418519 Glycine max
Glyma.12G122800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 13411395-13416394 Glycine max
Glyma.12G122800 10.0kb upstream 10.0kb upstream 12125 true Chr12: 13416395-13428519 Glycine max
Glyma.12G122800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 13418520-13428519 Glycine max
Glyma.12G122800 10.0kb downstream 10.0kb downstream 12125 true Chr12: 13406395-13418519 Glycine max
Glyma.12G122800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 13406395-13416394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297355 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.357218 0.0 1.35588    
cufflinks 1.06685 0.0 3.81928    
cufflinks 0.158081 0.0 0.619573 Low Low
cufflinks 0.62075 0.0 2.2921    
cufflinks 0.439427 0.0 1.65347    
cufflinks 0.464036 0.0 1.74109    
cufflinks 0.680051 0.0 2.50353    
cufflinks 1.15525 0.0 4.10914   High
cufflinks 1.01214 0.0 3.63822    
cufflinks 0.528        
cufflinks 0.019     Low Low
cufflinks 0.554        
cufflinks 0.753        
cufflinks 0.652        
cufflinks 0.142        
cufflinks 0.767        
cufflinks 0.081        
cufflinks 1.302        
cufflinks 0.68        
cufflinks 0.967        
cufflinks 0.01     Low Low
cufflinks 1.097        
cufflinks 1.063        
cufflinks 0.027     Low Low
cufflinks 0.963        
cufflinks 0.011     Low Low

0 Strain