Gene : Glyma.12G108900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  1089
Name:  ? Glyma.12G108900 Secondary Identifier:  ? PAC:30548052
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G108900 0.5kb upstream 0.5kb upstream 5735 true Chr12: 10083009-10088743 Glycine max
Glyma.12G108900 0.5kb upstream 0.5kb upstream 500 false Chr12: 10083009-10083508 Glycine max
Glyma.12G108900 0.5kb downstream 0.5kb downstream 5735 true Chr12: 10083509-10089243 Glycine max
Glyma.12G108900 0.5kb downstream 0.5kb downstream 500 false Chr12: 10088744-10089243 Glycine max
Glyma.12G108900 1.0kb upstream 1.0kb upstream 6235 true Chr12: 10082509-10088743 Glycine max
Glyma.12G108900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10082509-10083508 Glycine max
Glyma.12G108900 1.0kb downstream 1.0kb downstream 6235 true Chr12: 10083509-10089743 Glycine max
Glyma.12G108900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10088744-10089743 Glycine max
Glyma.12G108900 2.0kb upstream 2.0kb upstream 7235 true Chr12: 10081509-10088743 Glycine max
Glyma.12G108900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10081509-10083508 Glycine max
Glyma.12G108900 2.0kb downstream 2.0kb downstream 7235 true Chr12: 10083509-10090743 Glycine max
Glyma.12G108900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10088744-10090743 Glycine max
Glyma.12G108900 5.0kb upstream 5.0kb upstream 10235 true Chr12: 10078509-10088743 Glycine max
Glyma.12G108900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10078509-10083508 Glycine max
Glyma.12G108900 5.0kb downstream 5.0kb downstream 10235 true Chr12: 10083509-10093743 Glycine max
Glyma.12G108900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10088744-10093743 Glycine max
Glyma.12G108900 10.0kb upstream 10.0kb upstream 15235 true Chr12: 10073509-10088743 Glycine max
Glyma.12G108900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10073509-10083508 Glycine max
Glyma.12G108900 10.0kb downstream 10.0kb downstream 15235 true Chr12: 10083509-10098743 Glycine max
Glyma.12G108900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10088744-10098743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301063 5265 Fabidae View MSA
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.80663 0.0 16.0085   High
cufflinks 9.12118 0.0 24.4939   High
cufflinks 1.1001 0.0 3.7302    
cufflinks 1.1008 0.0 3.73811    
cufflinks 0.366726 0.0 1.35523    
cufflinks 1.13356 0.0 3.84605    
cufflinks 0.0154381 0.0 0.0664906 Low Low
cufflinks 0.727809 0.0 2.56896    
cufflinks 0.177792 0.0 0.678996 Low  
cufflinks 2.118        
cufflinks 0.063        
cufflinks 1.241        
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 2.739        
cufflinks 0.055     Low  
cufflinks 1.066        
cufflinks 4.22       High
cufflinks 1.588        
cufflinks 0.052     Low  
cufflinks 2.911        
cufflinks 5.626       High
cufflinks 0.1        
cufflinks 2.446        
cufflinks 0.041     Low Low

0 Strain