Gene : Glyma.12G109500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  1095
Name:  ? Glyma.12G109500 Secondary Identifier:  ? PAC:30548755
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G109500 0.5kb upstream 0.5kb upstream 6807 true Chr12: 10308026-10314832 Glycine max
Glyma.12G109500 0.5kb upstream 0.5kb upstream 500 false Chr12: 10314333-10314832 Glycine max
Glyma.12G109500 0.5kb downstream 0.5kb downstream 6807 true Chr12: 10307526-10314332 Glycine max
Glyma.12G109500 0.5kb downstream 0.5kb downstream 500 false Chr12: 10307526-10308025 Glycine max
Glyma.12G109500 1.0kb upstream 1.0kb upstream 7307 true Chr12: 10308026-10315332 Glycine max
Glyma.12G109500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10314333-10315332 Glycine max
Glyma.12G109500 1.0kb downstream 1.0kb downstream 7307 true Chr12: 10307026-10314332 Glycine max
Glyma.12G109500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10307026-10308025 Glycine max
Glyma.12G109500 2.0kb upstream 2.0kb upstream 8307 true Chr12: 10308026-10316332 Glycine max
Glyma.12G109500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10314333-10316332 Glycine max
Glyma.12G109500 2.0kb downstream 2.0kb downstream 8307 true Chr12: 10306026-10314332 Glycine max
Glyma.12G109500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10306026-10308025 Glycine max
Glyma.12G109500 5.0kb upstream 5.0kb upstream 11307 true Chr12: 10308026-10319332 Glycine max
Glyma.12G109500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10314333-10319332 Glycine max
Glyma.12G109500 5.0kb downstream 5.0kb downstream 11307 true Chr12: 10303026-10314332 Glycine max
Glyma.12G109500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10303026-10308025 Glycine max
Glyma.12G109500 10.0kb upstream 10.0kb upstream 16307 true Chr12: 10308026-10324332 Glycine max
Glyma.12G109500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10314333-10324332 Glycine max
Glyma.12G109500 10.0kb downstream 10.0kb downstream 16307 true Chr12: 10298026-10314332 Glycine max
Glyma.12G109500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10298026-10308025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122299575 5265 Fabidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.25407 0.0 20.0681   Low
cufflinks 9.71314 0.0 37.7232    
cufflinks 9.29986 0.0 32.0893    
cufflinks 20.2438 0.0 77.5864 High  
cufflinks 12.6144 0.0 47.6842    
cufflinks 5.47005 0.0 20.8095   Low
cufflinks 18.2329 0.0 69.4754    
cufflinks 22.3487 0.0 78.0258 High High
cufflinks 21.4799 0.0 82.8063 High High
cufflinks 1.899        
cufflinks 1.509        
cufflinks 1.468        
cufflinks 1.906        
cufflinks 1.712        
cufflinks 4.291       High
cufflinks 1.326        
cufflinks 0.676       Low
cufflinks 1.647        
cufflinks 1.653        
cufflinks 1.062        
cufflinks 1.913        
cufflinks 1.355        
cufflinks 1.181        
cufflinks 1.112        
cufflinks 1.196        
cufflinks 2.427       High

0 Strain