Gene : Glyma.12G111000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN Genomic Order:  1110
Name:  ? Glyma.12G111000 Secondary Identifier:  ? PAC:30547494
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G111000 0.5kb upstream 0.5kb upstream 3912 true Chr12: 10600725-10604636 Glycine max
Glyma.12G111000 0.5kb upstream 0.5kb upstream 500 false Chr12: 10604137-10604636 Glycine max
Glyma.12G111000 0.5kb downstream 0.5kb downstream 3912 true Chr12: 10600225-10604136 Glycine max
Glyma.12G111000 0.5kb downstream 0.5kb downstream 500 false Chr12: 10600225-10600724 Glycine max
Glyma.12G111000 1.0kb upstream 1.0kb upstream 4412 true Chr12: 10600725-10605136 Glycine max
Glyma.12G111000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10604137-10605136 Glycine max
Glyma.12G111000 1.0kb downstream 1.0kb downstream 4412 true Chr12: 10599725-10604136 Glycine max
Glyma.12G111000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10599725-10600724 Glycine max
Glyma.12G111000 2.0kb upstream 2.0kb upstream 5412 true Chr12: 10600725-10606136 Glycine max
Glyma.12G111000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10604137-10606136 Glycine max
Glyma.12G111000 2.0kb downstream 2.0kb downstream 5412 true Chr12: 10598725-10604136 Glycine max
Glyma.12G111000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10598725-10600724 Glycine max
Glyma.12G111000 5.0kb upstream 5.0kb upstream 8412 true Chr12: 10600725-10609136 Glycine max
Glyma.12G111000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10604137-10609136 Glycine max
Glyma.12G111000 5.0kb downstream 5.0kb downstream 8412 true Chr12: 10595725-10604136 Glycine max
Glyma.12G111000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10595725-10600724 Glycine max
Glyma.12G111000 10.0kb upstream 10.0kb upstream 13412 true Chr12: 10600725-10614136 Glycine max
Glyma.12G111000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10604137-10614136 Glycine max
Glyma.12G111000 10.0kb downstream 10.0kb downstream 13412 true Chr12: 10590725-10604136 Glycine max
Glyma.12G111000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10590725-10600724 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305400 5265 Fabidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00881 0.0 17.4972    
cufflinks 12.6702 0.0 43.2324    
cufflinks 5.5749 0.0 18.7238    
cufflinks 11.1482 0.0 38.3547    
cufflinks 8.22089 0.0 29.6671    
cufflinks 3.89042 0.0 14.4227    
cufflinks 123.69 0.0 545.128 High High
cufflinks 6.2438 0.0 20.4272    
cufflinks 8.37945 0.0 30.1245    
cufflinks 1.561        
cufflinks 0.831       Low
cufflinks 2.173        
cufflinks 1.23        
cufflinks 1.622        
cufflinks 1.157        
cufflinks 2.56        
cufflinks 1.03        
cufflinks 2.681        
cufflinks 3.673       High
cufflinks 3.3       High
cufflinks 0.74       Low
cufflinks 2.94        
cufflinks 2.335        
cufflinks 0.561       Low
cufflinks 2.959       High
cufflinks 1.124        

0 Strain