Gene : Glyma.12G111100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31867:SF7 - EXPANSIN-A20 Genomic Order:  1111
Name:  ? Glyma.12G111100 Secondary Identifier:  ? PAC:30546380
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G111100 0.5kb upstream 0.5kb upstream 2520 true Chr12: 10606530-10609049 Glycine max
Glyma.12G111100 0.5kb upstream 0.5kb upstream 500 false Chr12: 10608550-10609049 Glycine max
Glyma.12G111100 0.5kb downstream 0.5kb downstream 2520 true Chr12: 10606030-10608549 Glycine max
Glyma.12G111100 0.5kb downstream 0.5kb downstream 500 false Chr12: 10606030-10606529 Glycine max
Glyma.12G111100 1.0kb upstream 1.0kb upstream 3020 true Chr12: 10606530-10609549 Glycine max
Glyma.12G111100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10608550-10609549 Glycine max
Glyma.12G111100 1.0kb downstream 1.0kb downstream 3020 true Chr12: 10605530-10608549 Glycine max
Glyma.12G111100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10605530-10606529 Glycine max
Glyma.12G111100 2.0kb upstream 2.0kb upstream 4020 true Chr12: 10606530-10610549 Glycine max
Glyma.12G111100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10608550-10610549 Glycine max
Glyma.12G111100 2.0kb downstream 2.0kb downstream 4020 true Chr12: 10604530-10608549 Glycine max
Glyma.12G111100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10604530-10606529 Glycine max
Glyma.12G111100 5.0kb upstream 5.0kb upstream 7020 true Chr12: 10606530-10613549 Glycine max
Glyma.12G111100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10608550-10613549 Glycine max
Glyma.12G111100 5.0kb downstream 5.0kb downstream 7020 true Chr12: 10601530-10608549 Glycine max
Glyma.12G111100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10601530-10606529 Glycine max
Glyma.12G111100 10.0kb upstream 10.0kb upstream 12020 true Chr12: 10606530-10618549 Glycine max
Glyma.12G111100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10608550-10618549 Glycine max
Glyma.12G111100 10.0kb downstream 10.0kb downstream 12020 true Chr12: 10596530-10608549 Glycine max
Glyma.12G111100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10596530-10606529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315252 5265 Fabidae View MSA
124065667 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.108231 0.0 0.428751 Low Low
cufflinks 2.98211 0.0 9.37765   High
cufflinks 0.177114 0.0 0.687171 Low Low
cufflinks 0.585575 0.0 2.15361    
cufflinks 1.04978 0.0 3.73007    
cufflinks 0.426076 0.0 1.59417    
cufflinks 1.50546 0.0 5.18372    
cufflinks 4.05173 0.0 12.1729   High
cufflinks 1.2245 0.0 4.28733    
cufflinks 1.218        
cufflinks 0.028     Low Low
cufflinks 0.554        
cufflinks 0.841        
cufflinks 0.376        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.09        
cufflinks 0.041     Low Low
cufflinks 0.456        
cufflinks 1.947       High
cufflinks 0.461        
cufflinks 0.087       Low
cufflinks 0.532        
cufflinks 0.881        
cufflinks 0.161        
cufflinks 0.704        
cufflinks 0.072       Low

0 Strain