Gene : Glyma.12G111400 G. max Wm82.a2.v1
Defline:  (1 of 4) PF12796//PF13857//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) // Domain of unknown function (PGG) Genomic Order:  1114
Name:  ? Glyma.12G111400 Secondary Identifier:  ? PAC:30548626
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G111400 0.5kb upstream 0.5kb upstream 5970 true Chr12: 10708374-10714343 Glycine max
Glyma.12G111400 0.5kb upstream 0.5kb upstream 500 false Chr12: 10713844-10714343 Glycine max
Glyma.12G111400 0.5kb downstream 0.5kb downstream 5970 true Chr12: 10707874-10713843 Glycine max
Glyma.12G111400 0.5kb downstream 0.5kb downstream 500 false Chr12: 10707874-10708373 Glycine max
Glyma.12G111400 1.0kb upstream 1.0kb upstream 6470 true Chr12: 10708374-10714843 Glycine max
Glyma.12G111400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10713844-10714843 Glycine max
Glyma.12G111400 1.0kb downstream 1.0kb downstream 6470 true Chr12: 10707374-10713843 Glycine max
Glyma.12G111400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10707374-10708373 Glycine max
Glyma.12G111400 2.0kb upstream 2.0kb upstream 7470 true Chr12: 10708374-10715843 Glycine max
Glyma.12G111400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10713844-10715843 Glycine max
Glyma.12G111400 2.0kb downstream 2.0kb downstream 7470 true Chr12: 10706374-10713843 Glycine max
Glyma.12G111400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10706374-10708373 Glycine max
Glyma.12G111400 5.0kb upstream 5.0kb upstream 10470 true Chr12: 10708374-10718843 Glycine max
Glyma.12G111400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10713844-10718843 Glycine max
Glyma.12G111400 5.0kb downstream 5.0kb downstream 10470 true Chr12: 10703374-10713843 Glycine max
Glyma.12G111400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10703374-10708373 Glycine max
Glyma.12G111400 10.0kb upstream 10.0kb upstream 15470 true Chr12: 10708374-10723843 Glycine max
Glyma.12G111400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10713844-10723843 Glycine max
Glyma.12G111400 10.0kb downstream 10.0kb downstream 15470 true Chr12: 10698374-10713843 Glycine max
Glyma.12G111400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10698374-10708373 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.965493 0.0 4.11442   Low
cufflinks 1.82204 0.0 11.8198    
cufflinks 0.996696 0.0 5.52319    
cufflinks 0.956558 0.0 5.34888   Low
cufflinks 2.57108 0.0 13.0128    
cufflinks 4.14169 0.0 14.9846    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.10889 0.0 26.304   High
cufflinks 2.87209 0.0 11.7604    
cufflinks 0.642       High
cufflinks 0.077        
cufflinks 0.223        
cufflinks 0.761       High
cufflinks 0.4        
cufflinks 0.013     Low Low
cufflinks 0.142        
cufflinks 0.108        
cufflinks 0.166        
cufflinks 0.351        
cufflinks 0.065     Low  
cufflinks 0.133        
cufflinks 0.097        
cufflinks 0.298        
cufflinks 0.102        
cufflinks 0.077     Low  
cufflinks 0.238        

0 Strain