Gene : Glyma.12G111700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19282:SF158 - TETRASPANIN-19 Genomic Order:  1117
Name:  ? Glyma.12G111700 Secondary Identifier:  ? PAC:30548692
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G111700 0.5kb upstream 0.5kb upstream 5227 true Chr12: 10825973-10831199 Glycine max
Glyma.12G111700 0.5kb upstream 0.5kb upstream 500 false Chr12: 10830700-10831199 Glycine max
Glyma.12G111700 0.5kb downstream 0.5kb downstream 5227 true Chr12: 10825473-10830699 Glycine max
Glyma.12G111700 0.5kb downstream 0.5kb downstream 500 false Chr12: 10825473-10825972 Glycine max
Glyma.12G111700 1.0kb upstream 1.0kb upstream 5727 true Chr12: 10825973-10831699 Glycine max
Glyma.12G111700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10830700-10831699 Glycine max
Glyma.12G111700 1.0kb downstream 1.0kb downstream 5727 true Chr12: 10824973-10830699 Glycine max
Glyma.12G111700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10824973-10825972 Glycine max
Glyma.12G111700 2.0kb upstream 2.0kb upstream 6727 true Chr12: 10825973-10832699 Glycine max
Glyma.12G111700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10830700-10832699 Glycine max
Glyma.12G111700 2.0kb downstream 2.0kb downstream 6727 true Chr12: 10823973-10830699 Glycine max
Glyma.12G111700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10823973-10825972 Glycine max
Glyma.12G111700 5.0kb upstream 5.0kb upstream 9727 true Chr12: 10825973-10835699 Glycine max
Glyma.12G111700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10830700-10835699 Glycine max
Glyma.12G111700 5.0kb downstream 5.0kb downstream 9727 true Chr12: 10820973-10830699 Glycine max
Glyma.12G111700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10820973-10825972 Glycine max
Glyma.12G111700 10.0kb upstream 10.0kb upstream 14727 true Chr12: 10825973-10840699 Glycine max
Glyma.12G111700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10830700-10840699 Glycine max
Glyma.12G111700 10.0kb downstream 10.0kb downstream 14727 true Chr12: 10815973-10830699 Glycine max
Glyma.12G111700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10815973-10825972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041111 5273 Angiosperm View MSA
122307421 5265 Fabidae View MSA
124072815 5270 Rosid View MSA
123745432 5271 Pentapetalae View MSA
122787617 5272 Eudicot View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8706 0.0 38.5526    
cufflinks 15.3867 0.0 42.3952    
cufflinks 19.0581 0.0 51.5748    
cufflinks 15.3689 0.0 42.2762    
cufflinks 13.7246 0.0 38.1682   Low
cufflinks 16.1834 0.0 44.4007    
cufflinks 24.9285 0.0 66.8116 High High
cufflinks 18.401 0.0 50.0413    
cufflinks 15.1792 0.0 41.8236    
cufflinks 2.317       Low
cufflinks 4.65       High
cufflinks 2.887        
cufflinks 2.606        
cufflinks 2.749        
cufflinks 4.743       High
cufflinks 4.077        
cufflinks 1.617       Low
cufflinks 2.996        
cufflinks 3.234        
cufflinks 5.239       High
cufflinks 3.267        
cufflinks 4.58        
cufflinks 2.602        
cufflinks 4.008        
cufflinks 4.909       High
cufflinks 2.62        

0 Strain